Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1130 ATGGCAATAGAAAAGCTTGGAGGTTGTTCAAAGTTCTTTGAATGCTCAAAACCCTACTTGGCCATGATTTCTTTACAGTTTGGTTATGCTGGCATGACCATTATCACTAAGATTTCACTCAACCAAGGCATGAGTCATTATGTTCTTGTGGTTTATCGCCATGCTTTTGCTACCATTGCCATAGCTCCTTTTGCATTTCTTTTTGAAAGGAAAGGTCAACCGAAGATAAGATTCTCAATTTTCATGCAAATATTTATCCTAGCTCTTCTAGGGCCAGTGATTGATCAAAATTTCTTTTATGCTGGGTTGAAACTCACATCCCCAACTTTCGCATGTGCAATAAGCAACATGCTTCCAGCTATGACTTTTGTAATAGCAGTCTTTTGCAGGATGGAGAAGATAAACATAAAGAAAGTGAGAAGCATAGCAAAGATAGTGGGAACATTAGTGACAGTTGGAGGGGCTATGCTGATGACCTTATACAGAGGTCCTATAGTGGAGATGGTTTGGATCAAAGAAGCTCACTATAAAAGCAATGGAACAACAAGCACAGGATCATTGGACAGAGATTGGTTATTGGGTTGCATTTTTCTCATCATTTCCACCATTGCTTGGGCTTCACTCTTTGTTTTACAAGCAAAAGCTATACAGACATACAAGAATCATCAGCTAACCTTAACTTCACTTGTGTGCTTTATAGGCGCAGTTCAAGCTATTGTTGTTACTTATGTTGTTGAACACAATCCTTCAGTTTGGAAAATTGGATGGGATATAAACTTACTTACTGCTGCATATTCAGGGGTTGTTTCATCAAGCATATCATACTATGTACAAGGACTGGTAATCAAGAAGAAAGGACCTGTCTTTGCAACTTCCTTTAGCCCTTTAATGATGATCATTTCTGCTATCATGGGTTACTTTATCCTTGCAGAAAAAACTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAATAGAGAATCAAGTGGATGCTGAAATTCCCTTACCTGTGAATGATGATGAAAGTTCAGTAACAGAAGAGCAAAATATGGTTGATGCTAGAGATTATTTCACTGAAGAAAAACATGATCAGAAAGTAGAACCCATCGATATCAAGTTTTCTTCAATTGTAATTACGTTGTCTATTCAAGAATCTCCCACTAGATAA 1212 0.3754 MAIEKLGGCSKFFECSKPYLAMISLQFGYAGMTIITKISLNQGMSHYVLVVYRHAFATIAIAPFAFLFERKGQPKIRFSIFMQIFILALLGPVIDQNFFYAGLKLTSPTFACAISNMLPAMTFVIAVFCRMEKINIKKVRSIAKIVGTLVTVGGAMLMTLYRGPIVEMVWIKEAHYKSNGTTSTGSLDRDWLLGCIFLIISTIAWASLFVLQAKAIQTYKNHQLTLTSLVCFIGAVQAIVVTYVVEHNPSVWKIGWDINLLTAAYSGVVSSSISYYVQGLVIKKKGPVFATSFSPLMMIISAIMGYFILAEKTYLGGVIGAILIVIGLYSVLWGKHKEQIENQVDAEIPLPVNDDESSVTEEQNMVDARDYFTEEKHDQKVEPIDIKFSSIVITLSIQESPTR* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1130 403 PANTHER WAT1-RELATED PROTEIN 12 369 IPR030184 GO:0016021|GO:0022857
Vra6g1130 403 PANTHER WAT1-RELATED PROTEIN 12 369 - -
Vra6g1130 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Vra6g1130 403 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020|GO:0016021
Vra6g1130 403 Pfam EamA-like transporter family 18 147 IPR000620 GO:0016020|GO:0016021
Vra6g1130 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1130 Vra-Chr6 17842453 17845175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1130 1 400 Nodulin-like Gene Family AT5G07050 61.728 6.48e-178 499