Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1129 ATGGCTACCGAAAAGCTTGGAGGTTGTGCCAAGTTCTTTGCTAGCTCAAAACCCTACTTGGCTATGATCTCTTTGCAGTTTGGCTATGCTGGCATGAACATTATCACAAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGTCATGCTTTCGCAACTGCTGTTATAGCTCCTTTTGCATTTATCTTTGAAAGGAAAGGTCAACCGAAGATAACATTCTCAATTTTCATGCAACTTTTTATCCTAGGTCTTCTTGGGCCAGTGATTGATCAAAATTTCTACTATGCCGGGTTGAAGCTCACATCTCCAACCTTTTCATGTGCAATGAGCAACATGCTTCCAGCTATGACTTTTGTGATGGCTGTGTTTTGCAGAATGGAGAAGATAAACATGAAGCAAGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTTGCAGGGGCTATGCTGATGACCTTATACAGAGGTCCTATAGTGGAGATGGTGTGGGCCAAACATCCCCACAATAAAACCAATGGAACAACAAGCACAGGATCATTGGACAAAGATTGGTTCTTAGGATGCATCTTTCTTATCATTGCCACCCTTGCATGGGCTTCCCTCTTTGTTTTACAAGCAAAAGCTATACAAACCTACAAGAATCATCAACTCAGCCTCACTTCACTTGTGTGCTTTATTGGCACTGTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAACCCTGCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTTGTGATTAAGAAGAAAGGACCTGTCTTTGCAACTGCTTTTAGCCCTTTGATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAACAAATTTATCTTGGAGGTGTGATTGGTGCAATCTTAATTGTTATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAATGGAGAGTAAAGTGGCAGATGAAATTCCATTGGCTGTAAAAGATGGTCAAAGTTGTGTAATTTCAGGGCTAAATATGATTGATGTAAAAAATGATTTTACTGAAGAAGATTCCAAGAATAAGAAGCCCTCCTCAGTTGTAATAAACATGACTGTTGCAGAGCCTCCAAGCAGAGATAACCAAGAGGGAAAGGCTTAA 1215 0.4058 MATEKLGGCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFSIFMQLFILGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKINMKQVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNKTNGTTSTGSLDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTVQAIAVTFVVEHNPAVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQMESKVADEIPLAVKDGQSCVISGLNMIDVKNDFTEEDSKNKKPSSVVINMTVAEPPSRDNQEGKA* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1129 404 PANTHER WAT1-RELATED PROTEIN 12 367 IPR030184 GO:0016021|GO:0022857
Vra6g1129 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 337 - -
Vra6g1129 404 PANTHER WAT1-RELATED PROTEIN 12 367 - -
Vra6g1129 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Vra6g1129 404 MobiDBLite consensus disorder prediction 374 404 - -
Vra6g1129 404 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020|GO:0016021
Vra6g1129 404 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1129 Vra-Chr6 17837402 17839641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1129 1 393 Nodulin-like Gene Family AT5G07050 67.588 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1129 - - gmx:100804390 701.049