Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1106 ATGGCATTCAAGAAGTTCATAATCAGAAGCTACGAGGGTCACTCTGATAGAGCTAAGGTAGAAGATCTTGAAAGAAGATGCAAGGTAGGACCATCAGAAAGCGTGTTAGACACTATGGGTGACCCCATGTGTAGGATTCGAAACAGTCCCATCTATATAATGCTGGTGGCAGAGATGGAGAATGAACTGGTTGGTGTCATTCAAGGCTTAATAAAAATGGTGACAGTTCATAGTCATCCTCCAAAGGATATGGCAAAGGTGGGGTATGTCTTAGGCCTCAGAGTTTCTCCTCACAGCAGAAGAAATGGCGTTGGCTCAAGTCTTGTGGAAAGACTAGAAGAATGGTTCAGTTCCAATGATGTGGAATATGCATACATGGCCACAGAGAAAGAAAATCACGCCTCAATGAACCTCTTCATGGAGAAGTTTTGCTACACCAAGTTTAGGACTCCAACTATACTCATAAACCCAGTGAATAATCATCTGTTTGAAATCTCATCCGACATTGAGATAGCTATGGTGAAGGTTGAAGAGGCTGAATCCCTTTATAGAAGATTCATGGGATCCACTGAGTTCTTCCCTAGTGACATAGAGAATATACTAAGGAACAAGCTGAACCTGGGAACTTGGGTGGCTTATTTGAAAGGGGATAGTGATTTTGGTTTAGATGGAAAAGTTCCGAATAGTTGGGCTATGGTTAGTGTTTGGAACTGTGGGGAAATCTTCAAGCTGAAGATAGGGAAAGCACCTTTGTCTTGCATGTTATTGACAAAGGGTTGGGGGTTGATTGGTAGAATGTTCCCATGCATGAAATTGCCAACCTTGCCTAATTTCTTTAGTCCTTTTGGGTTCTACTTCATGTATGGTGTGTATCAAGAAGGGCCATTCTCTGGAAAGTTGATTAGGGGATTGTGTAAGTTTGTGCATAACATGGCTTCTAGGAGTGAACACTGCAAGATCATTGTGACAGAAATTGGAGGAAGAGATGATCTGATTCATCATATTCCACATTGGAAATTGCTTTCATGCGAGGACTTGTGGTGCATAAAGGCTTTGAACAATCAAGGAACTAACAAGTTTCATGAATTCAGCAACACTCAGCCACCAAGAACTCTCTTTGTAGACCCACGAGAAGTCTAA 1140 0.4184 MAFKKFIIRSYEGHSDRAKVEDLERRCKVGPSESVLDTMGDPMCRIRNSPIYIMLVAEMENELVGVIQGLIKMVTVHSHPPKDMAKVGYVLGLRVSPHSRRNGVGSSLVERLEEWFSSNDVEYAYMATEKENHASMNLFMEKFCYTKFRTPTILINPVNNHLFEISSDIEIAMVKVEEAESLYRRFMGSTEFFPSDIENILRNKLNLGTWVAYLKGDSDFGLDGKVPNSWAMVSVWNCGEIFKLKIGKAPLSCMLLTKGWGLIGRMFPCMKLPTLPNFFSPFGFYFMYGVYQEGPFSGKLIRGLCKFVHNMASRSEHCKIIVTEIGGRDDLIHHIPHWKLLSCEDLWCIKALNNQGTNKFHEFSNTQPPRTLFVDPREV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1106 379 Pfam Acetyltransferase (GNAT) family 44 142 IPR000182 GO:0016407
Vra6g1106 379 CDD NAT_SF 54 125 - -
Vra6g1106 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 208 IPR000182 GO:0016407
Vra6g1106 379 Gene3D - 4 149 - -
Vra6g1106 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 379 - -
Vra6g1106 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 13 151 IPR016181 -
Vra6g1106 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1106 Vra-Chr6 17263624 17265035 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra6g1106 Acetyltransf_1 4.3e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1106 - - gmx:100799505 624.394