Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1011 ATGTTGCTCGAAATCGCAATAGGGTTGTTGGTGCTTGGTCTGTTTCTGCACCTGCGTCCCACACCCACCGCAAAATCGAAGGCCCTTCACCACCTTCCCAACCCTCCGAGCCCAAAGCCTAGGCTTCCGTTCGTTGGACACCTTCACCTTTTGAAAGACCAACTTCTTCACCACTCTCTCCTCACTCTCTCCCAACGTTATGGCCCTCTGTACTCTCTCTACTTTGGCTCTATGCCCACCGTTGTTGCCTCTACCCCTGAGCTCTTCAAACTCTTCCTTCAAACCCACGAGGCTGCTTCCTTCAACACAAGGTTCCAAACCTCTGCCATTAAGCGCCTCACTTATGACAACTCCGTTGCCATGGTTCCCTTTGGTCCTTACTGGAAGTTCATCAGGAAACTCATCATGAACGACCTCCTCAACGCCACCACCGTCAACAAGTTGAGGCCATTGAGGAGCCATGAGATCCGCAAGGTTCTCAGAGTTCTCGCCCAAAGTGCAGAGGCTCAACAACCCCTTAACGTCACCGAGGAGCTTCTCAAGTGGACCAACAACACCATCTCCATGCTCATGCTGGGTGAGGCCGAAGAGGTTAGAGATTTGGCTCGCGAGACGGTTAAGATTTTCGGAGAGTACAGTCTGACCGACTTCATCTGGCCCTTGAAGAAGCTCAAGTTTGGAAAGTACGAGAAGAGGATTGATGAAATATTCAACAAGTTCGATCCCGTCATTGAGAAGGTTATCAAGAAGCGCCAAGAGATCGTGAGAAGGAGAAAGAATGGAGAAGTTGTTGAGGGAGAGCAGAGCGGTATCTTCCTCGATACTTTGCTTGAATTCGCTGAGGACGAGACTATGGAGATCAAAATTACCAAGGAGCAGATCAAGGGTCTTGTTGTGGATTTCTTCTCAGCAGGGACAGATTCCACAGCCGTGGCAACTGAGTGGGCTTTGGCAGAGCTGATCAACAACCCTAGGGTGTTGCAAAAGGCTCGGGAAGAGGTGTACAGTGTTGTGGGAAAAGATAGACTGGTTGATGAAGTTGATACTCAAAACCTTCCTTACATCAGGGCGATTGTGAAGGAGACATTCCGCATGCACCCACCACTCCCTGTGGTGAAGAGAAAGTGTGTGGAAGAGTGTGAGATTGATGGGTGTGTGATCCCAGAGGGTGCATTGATACTTTTCAATGTGTGGGCTGTAGGAAGAGACCCTAAGTACTGGGACAGACCATCGGAATTTCGTCCCGAGAGATTCTTAGAAAGTGGAGGTGAAGGGGGAGTTGGTCCTATTGATCTAAGGGGACAGCATTTTCAACTTCTCCCATTTGGGTCAGGTAGGAGAATGTGCCCCGGAGTGAATTTGTCTACTTCAGGAATGGCAACTCTTCTTGCATCTGTTATCCAGTGCTTTGACCTGCAAGTGGTTGACCCTCAAGGACACATACTCAAAGGTGATGATGCCAAAGTTAGCATGGAAGAGAGAGCTGGCCTCACAGTTCCCAGAAAACACAACCTCGTATGTCTTCCACTTGCAAAAACAACCCTCGCAGCCAAACTCCTCTCCTCATAG 1569 0.4946 MLLEIAIGLLVLGLFLHLRPTPTAKSKALHHLPNPPSPKPRLPFVGHLHLLKDQLLHHSLLTLSQRYGPLYSLYFGSMPTVVASTPELFKLFLQTHEAASFNTRFQTSAIKRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVNKLRPLRSHEIRKVLRVLAQSAEAQQPLNVTEELLKWTNNTISMLMLGEAEEVRDLARETVKIFGEYSLTDFIWPLKKLKFGKYEKRIDEIFNKFDPVIEKVIKKRQEIVRRRKNGEVVEGEQSGIFLDTLLEFAEDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWALAELINNPRVLQKAREEVYSVVGKDRLVDEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCVEECEIDGCVIPEGALILFNVWAVGRDPKYWDRPSEFRPERFLESGGEGGVGPIDLRGQHFQLLPFGSGRRMCPGVNLSTSGMATLLASVIQCFDLQVVDPQGHILKGDDAKVSMEERAGLTVPRKHNLVCLPLAKTTLAAKLLSS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1011 522 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vra6g1011 522 PANTHER 2-HYDROXYISOFLAVANONE SYNTHASE 2 518 - -
Vra6g1011 522 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 SUPERFAMILY Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g1011 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1011 Vra-Chr6 13679651 13681594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1011 32 512 Cytochrome P450 AT5G06900 36.992 1.10e-106 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1011 K23179 K24188 gmx:100037450 885.945