Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0983 ATGAGAGAACAACCAGTCTTTCATCTTGAGGAACATGGTCAGACAGAGAGGTCCCAATGGGTGCTTGATTCTCCCAATCCACCCCCTCTTTGGAAAAAGATATTTACTTCTGTCAAAGAAACCATTCTGCCTCATGGGAACAAATTCTGCTTCTCATCCAAGAGGAAAACTTCCCGTGGACGTGCTTTCTCATGCTTGCAGAATCTGTTCCCTATCATTATTTGGTTAAGAGATTACAAAGCCTCCAAGTTCAAAGATGATCTCTTGGCTGGCTTAACTCTTGCCAGCCTCAGCATACCTCAGAGCATAGGGTATGCTACGTTAGCAAAAGTTGCTCCTGAATATGGCCTGTATACTAGTGTTATTCCTCCTCTTATTTATGCTCTGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTGGCTGTGGTGTCAATGCTATTATCTTCTCTGGTTCCAAAAGTGGAAGATCCTGTTGCCAATCCTCATGCCTACAGAAATCTTGTCTTTACTGTGACTTTCTTCACTGGAATTTTCCAAACTGCATTTGGTGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCGCATGCTGCCTTAGTTGGATTCATGGCAGGCGCTGCCGTCATTATAGGTCTTCAGCAGCTCAAAGGTTTGCTGGGGATTAGTCACTTCACCTCCAAAACAGATGTAGTATCAGTGTTGGCATCTGTTTATAAGTCACTACATCATCAAATTGCCTCAGGAGAAAAATGGAATCCTCTGAATTTTGTCCTCGGATGTTCATTCTTGATTTTCATTCTAATTACCCGTTTTATTGGCAGAAGAAACAGAAAGTTTTTCTGGTTGCCTGCTGTTGCTCCCCTTCTATCAGTTATACTATCAACTTCGATCGTATATTTGTCTAGAGCTGATAAGCATGGTGTTAATATAATAAAGCATGTTAAAGGAGGTCTGAATCCAAGTTCACTGCACCAGTTGCAACTCCATGGTCCACACGTTGGACAAGCAGCTAAAATTGGTTTGATTTGTGCAGTTATAGCACTGACTGAAGCTATAGCGGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGGAACAAGGAAATGTTATCAATGGGCTTCATGAACATTGCTGGATCTTTGACTTCATGCTATGTAGCAACGGGTTCTTTCTCAAGAACTGCTGTGAATTTTAGTGCTGGATGTCAGACAGCAGTGTCAAATATTGTGATGGCTGTTACAGTGTTTTTATCCCTGGAATTGTTTACAAGGCTCTTATACTACACCCCTGTGGCTATCCTTGCCTCTATTATTCTCTCTGCTCTTCCTGGATTAATTGACCTAAGTGAGGCTTGCTATATTTGGAAGGTTGACAAATTGGACTTTCTTGCCTGTATTGGAGCATTTCTCGGGGTCTTGTTTGCAACAGTAGAGATTGGCCTTCTTGTTGCAGTGATAATTTCGTTTGCAAAGATACTGATTCAATCAATTCGACCAGGAATAGAAGTTCTAGGTAGAGTCCCAAGAACAGAAGCCTTCTGTGATGTTACTCAATATCCCATGGCCATAAGCACTCCAGGAATCACAGTGATACGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTGTCAGAGAAAGAATACTCAAGTGGGTTTCTCAAGATGAAGATGACCCTAAAGAAGCCACCAAGGGTCGAGTCCAAGCAGTAATTCTGGACATGACAAACCTGATGAATGTTGATACTTCTGGAATTCTAGCACTTGAGGAACTGCACAAGAGGTTGCTTTCCCGAGGAGTAGAATTAGCTATGGTGAACCCAAGGTGGCTAGTAATCCACAAGCTTAAGCTGGCACACTTTGTAGACAAGATTGGAAAAGAATGGGTTTTCCTTACTGTCGGAGAAGCCGTAGATGCATGCCTTTCTGCCAAAATTGCAAGAGCTTGA 1965 0.4224 MREQPVFHLEEHGQTERSQWVLDSPNPPPLWKKIFTSVKETILPHGNKFCFSSKRKTSRGRAFSCLQNLFPIIIWLRDYKASKFKDDLLAGLTLASLSIPQSIGYATLAKVAPEYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSSLVPKVEDPVANPHAYRNLVFTVTFFTGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAVIIGLQQLKGLLGISHFTSKTDVVSVLASVYKSLHHQIASGEKWNPLNFVLGCSFLIFILITRFIGRRNRKFFWLPAVAPLLSVILSTSIVYLSRADKHGVNIIKHVKGGLNPSSLHQLQLHGPHVGQAAKIGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVFLSLELFTRLLYYTPVAILASIILSALPGLIDLSEACYIWKVDKLDFLACIGAFLGVLFATVEIGLLVAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGITVIRISSGSLCFANANFVRERILKWVSQDEDDPKEATKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKEWVFLTVGEAVDACLSAKIARA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0983 654 TIGRFAM sulP: sulfate permease 71 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra6g0983 654 Pfam STAS domain 523 642 IPR002645 -
Vra6g0983 654 Gene3D STAS domain 502 649 IPR036513 -
Vra6g0983 654 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Vra6g0983 654 ProSiteProfiles STAS domain profile. 539 646 IPR002645 -
Vra6g0983 654 CDD STAS_SulP_like_sulfate_transporter 523 639 - -
Vra6g0983 654 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Vra6g0983 654 PANTHER SLC26A/SULP TRANSPORTER-RELATED 10 652 - -
Vra6g0983 654 PANTHER SULFATE TRANSPORTER 10 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra6g0983 654 Pfam Sulfate permease family 84 470 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0983 Vra-Chr6 11384854 11389321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0983 12 651 Inorganic Solute Cotransporters AT5G10180 63.396 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0983 K17469 - gmx:100776591 1217.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0983 6 11384854 11389321 Vra6g0983 6 11384854 11389321 ECH
Vra6g0983 6 11384854 11389321 Vra5g0913 5 15318665 15322876 PCT