Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0946 ATGGCCTCTCTCTCCCTTTTGCACCTTCTTCAGACACACTCCTCTGCAGCTTTACTTGTTGTGGCTGCTTCATCTCTTCTATTTCTCTTCCTGCTGCTCCGCCTCATACCAGGATTCACTCGCAGACATGCAGAACTTCCCAAAGTACCAGCTGTTCCTGGACTGCCCATCGTAGGGAATCTACTGCAGTTGAAGGAGAAGAAGCCTTACAAGACCTTCGCACGGATGGCTCAAAAACATGGACCTATCTATTCCATCAGAACCGGTTCTTCCTCAATCATTGTTCTCAACTCCACCAATCTTGCCAAGGAGGCCATGGTGACCAGGTTTTCGTCGATTTCAACAAGGAAGCTATCAAAAGCACTGACGATTCTGACTTCTGATAAACGTATGGTTGCCACAAGCGACTACAATGAGTTTCACAAAACGGTGAAAAAACATATCCTTGGAAACGTTTTGGGAGCCGCTGCACAGAAGCGGCATCGTCTCAACAGAGAAAACCTGGTGGAAAATATTTTGAGCCAGTTTAGTGAACATGTGAAGACCTTCTCTGATTTGGCAGTTAACTTTAGAAATATATTCGCATCTGAACTTTTTATATTAGCACTGAAGCAAGCTCTGGGAAGTAATATAGAGTCCGTTTATGTGGAGGAGCTTAGGGTTACATTATCAAGAGAGGACTTATATAAGGTTCTAGTGCTTGATATGATGGAGGGAGCCATTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAGGTGGATTCCTAATAGGAGTGTGGAGAAGAAAATTCAGAATTTGTCTTTCCGGAGAGAAGTTGTCATGAAGGCCTTGATGAATGAGCAGAAGAAGAGAATGGATTCAGGAAAGGTACTGAATTGTTTTTTTGACTACCTAGTATCCGAAGCTAAAGAACTGAGTGAACATGAAATTTCCATGCTACTCTGGGAGACAATTATTGAAACATCTGATACTACATTGGTGACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAACTCGTCAGGCACGTTTATATGCGGAGCTTCAAAATGTATGTGGAGAAGAAAAGGTTACAGAGGAGCAATTATCTAAGCTACCTTACTTGGGAGCTGTATTCCATGAAACATTAAGGAAGTATAGTCCAGCTCCAATCGTGCCAATAAGATATGCTCACGAAGATACAGAATTGGGAGGATATCATATTCCTGCTGGAAGCCAGATTGCAATAAATATATATGGATGCAACATGGACAGCAACAAGTGGGAAAATCCTCATGAGTGGATGCCTGAGAGATTTGTTGATGAAAAATATGACCCCTTGGATTTATACAAGACCATGGCCTTTGGAGCTGGGAAGAGGGTGTGTGCAGGGTCTCTTCAGGCCATGTTGATATCCTGCACAGCAATTGGGAGATTTGTTCAACAATTTGAGTGGGAGCTGGGACAAGGGGAGGAGGAGAATGTGGATACATTGGGCCTTACCACTCACAGACTCCATCCCCTTCTGGTGAAACTCAGGCCAAGAAATCAATACATCAAGTAG 1551 0.4326 MASLSLLHLLQTHSSAALLVVAASSLLFLFLLLRLIPGFTRRHAELPKVPAVPGLPIVGNLLQLKEKKPYKTFARMAQKHGPIYSIRTGSSSIIVLNSTNLAKEAMVTRFSSISTRKLSKALTILTSDKRMVATSDYNEFHKTVKKHILGNVLGAAAQKRHRLNRENLVENILSQFSEHVKTFSDLAVNFRNIFASELFILALKQALGSNIESVYVEELRVTLSREDLYKVLVLDMMEGAIEVDWRDFFPYLRWIPNRSVEKKIQNLSFRREVVMKALMNEQKKRMDSGKVLNCFFDYLVSEAKELSEHEISMLLWETIIETSDTTLVTTEWAMYELAKDKTRQARLYAELQNVCGEEKVTEEQLSKLPYLGAVFHETLRKYSPAPIVPIRYAHEDTELGGYHIPAGSQIAINIYGCNMDSNKWENPHEWMPERFVDEKYDPLDLYKTMAFGAGKRVCAGSLQAMLISCTAIGRFVQQFEWELGQGEEENVDTLGLTTHRLHPLLVKLRPRNQYIK* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0946 516 Gene3D Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 SUPERFAMILY Cytochrome P450 46 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 Pfam Cytochrome P450 51 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 13 512 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Vra6g0946 516 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 13 512 - -
Vra6g0946 516 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0946 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0946 Vra-Chr6 10459988 10462784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0946 39 511 Cytochrome P450 AT5G25900 63.598 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0946 K04122 - gmx:100802970 798.89