Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0945 ATGCATGGCATCTGTCACCATAAACTGTCTATCATTTATCATATCTGCACAAGCAGTTTCTTTCATGCAAAGAGACAAAGACAGAGAGTTTTGCTTTGTTTAATTTCTTTCTCCTTACACACAATGGAGGGAAAGAACATGAAAACTGTGAAGGAATGGTTGAGTTCATCCCAGGTTGTATTGAGCATGTTTGTGGTGCAAGTTGTTATGACTGGGATGCAGTTGCTGTCAAGGGTCATATTGGTTCAAGGAACTTTCATTGGTGCACTTATTGTTTATCGTCACCTTGTTGCTGCTCTTTGTGTTGCTCCATTTGCACTCTACCTTGAAAGAGGAAAACCAAAGAAATTCAACTGTGAGGTCTGGTGTTGGCTCTTCGTCAATGCACTAACAGGGATGACAATGGCTCAAGGATTGTTTTATTATGGTCTGCGAGATACTTCTGCTGCCTACTCTATGAGTCTTCTGAACTTGGTTCCTATAATCACATTCTTTACCTCTATCATACTCAGAATGGAGAAACTGAAGTGGGAAACATGGGTTGGTAAAGCTAAGTCTGTTGGGTCAATTCTATGTGTTGGAGGAGCATCACTTAGCAGTGTTTACAAAGGGAAGGAATTTTTTCTTGGACACCATATTCATCCTACTCATCAAACTGCACCACACAAAACCCACATCCTACATGGTACTATCTTTTTGGTTTGCAGCTGCTTCTCCTACACAGCCTGGTTTATTGCACAATACTGGGGAACAATGCTAGCATGCATTCTGGCGGCAATTCAAGCAGCAGCAGTAGGTGTTTGCTTAGATTCCAGTAAAGCTGCTTGGAGATTAGAGTGGAATCTACAACTCATCACTATAGTCTACTCGGGAGCATTGGCTACTGCTGCTACATTCTGCATAATATCTTGGGCAATAAGAATGAAAGGACCTACTTATCCTCCAATGTTCAATCCTCTGTCTCTTATTTTTGTGGCCTTTTCAGAAGCTCTCATTCTTGGACAACCTTTGGGAGTTGGAACGTTGGGTGGCATGGTTTTGATCATAATGGGATTATACTTCTTTTTGTGGGGCAAAAGCAATGAGACACATAATGCAGAAGGAACAACCACTGCAACCCAATCAACATCCACAGTAGTACCAAGTGCTTCTCCCACCCATTCTGTGCTTCTTCAAATTCAAAAGACTCAGAATACTTCATCATGTTAA 1209 0.4144 MHGICHHKLSIIYHICTSSFFHAKRQRQRVLLCLISFSLHTMEGKNMKTVKEWLSSSQVVLSMFVVQVVMTGMQLLSRVILVQGTFIGALIVYRHLVAALCVAPFALYLERGKPKKFNCEVWCWLFVNALTGMTMAQGLFYYGLRDTSAAYSMSLLNLVPIITFFTSIILRMEKLKWETWVGKAKSVGSILCVGGASLSSVYKGKEFFLGHHIHPTHQTAPHKTHILHGTIFLVCSCFSYTAWFIAQYWGTMLACILAAIQAAAVGVCLDSSKAAWRLEWNLQLITIVYSGALATAATFCIISWAIRMKGPTYPPMFNPLSLIFVAFSEALILGQPLGVGTLGGMVLIIMGLYFFLWGKSNETHNAEGTTTATQSTSTVVPSASPTHSVLLQIQKTQNTSSC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0945 402 Pfam EamA-like transporter family 61 193 IPR000620 GO:0016020|GO:0016021
Vra6g0945 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 280 360 - -
Vra6g0945 402 PANTHER WAT1-RELATED PROTEIN 58 376 - -
Vra6g0945 402 PANTHER WAT1-RELATED PROTEIN 58 376 IPR030184 GO:0016021|GO:0022857
Vra6g0945 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 93 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0945 Vra-Chr6 10448084 10452729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0945 42 399 Nodulin-like Gene Family AT5G07050 28.010 5.15e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0945 - - vra:106763417 769.615