Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0920 ATGGCCACCCGTACTAATCCTCCTTCTAACTTCTGTTTCCTCCTTCTATTGCTTCTACCACACTTTCATTTGGGCAAAAGCCAACTTCAGCTGAATTACTACTCTAAAAGCTGCCCGAAAGCAGAGGACATCATCAAGCAACAAGTCACACAACTATATCACAAGCATGGAAACACTGCCGTCTCATGGGTTAGAAATCTCTTCCACGATTGCGTCGTCCAGTCATGCGACGCATCGCTACTTTTAGAGACGGCGCGCGACGGTACTTTAGTGTCGGAGCAGACATCGGAGAGAAGTATCGGTATGAGGAACTTTAAGTACGTAAACACCATCAAAGCCGCAGTTGAAGAAGAATGTCCCTTCACTGTGTCATGCGCTGACATTATTGCTCTTTCTGCTAGAGATGCCATTTCCTTGTTGGGTGGACCCAGCATTGAAATGAAGACAGGGCGAAGGGATAGCAAACAAAGCTATGCAAAAGAGGTGGAAGACTTGATTCCAAACCACAATGATTCCATTTCCGTAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGAGCTCACTCGGTAGGAAGAGTTCACTGCGTGAATCTTGTACACAGATTATATCCTACTGTGGACACAACACTTGATCCTGCACATGCTGAGTACCTGAAACGTCGGTGTCCAACACCGAATCCTGATCCAAAGGCTGTCTTGTATTCAAGGAATGACCTGAAAACGCCCATGATCATTGACAACAACTACTACAAGAACATCTTGGAACATAAGGGCCTTCTCCTTGTGGATCAAGAGCTTGCCACTGACTCAAGAACAGCACCTTACGTCCAAAACATGGCTAATGACAATCAATACTTCCACCAGCAGTTCTCAAGGGCCGTTCAATTGTTATCTGAGACCAATCCTCTATCAGGGGATCAAGGAGAAATTAGAAAGGACTGTCGCTATCTCAATGTCGATTAA 990 0.4556 MATRTNPPSNFCFLLLLLLPHFHLGKSQLQLNYYSKSCPKAEDIIKQQVTQLYHKHGNTAVSWVRNLFHDCVVQSCDASLLLETARDGTLVSEQTSERSIGMRNFKYVNTIKAAVEEECPFTVSCADIIALSARDAISLLGGPSIEMKTGRRDSKQSYAKEVEDLIPNHNDSISVVLSRFQAIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTVDTTLDPAHAEYLKRRCPTPNPDPKAVLYSRNDLKTPMIIDNNYYKNILEHKGLLLVDQELATDSRTAPYVQNMANDNQYFHQQFSRAVQLLSETNPLSGDQGEIRKDCRYLNVD* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0920 329 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PANTHER PEROXIDASE 21 14 325 - -
Vra6g0920 329 SUPERFAMILY Heme-dependent peroxidases 28 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 Pfam Peroxidase 46 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PANTHER PEROXIDASE 25-RELATED 14 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 Gene3D Peroxidase, domain 2 168 307 - -
Vra6g0920 329 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0920 329 Gene3D - 32 324 - -
Vra6g0920 329 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0920 Vra-Chr6 9932927 9934499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0920 31 327 Peroxidase AT2G37130 75.503 5.49e-173 480