Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0898 ATGACTTCTGTGTACTCCTATTTCGTTGATACAAAAGTGAAAGGAAAACCGGATGTGTATAGCGTAGTTTCGAATGCTGCATTTGCTATTATGTCTTTGGGTTTATCAACTTTTAGTCCCTTTGGATTCGAGGTTGATCTCCTGTATTTTTTCTGTGGAGTTCTAATGGTGCAGCTCATGAAAATTAAACTATGGTTGATCATTGTTGGAGGGTGTTTCAGTTATTCCCTCAACATTCTTCATTCCACTTTAGATACTGATCAACGCTCATATGATCTTCTAAACATTACCATTGATCCACGATCACAATCACAATCACAAGTAAGCACTGCTGGTGTTTCTCCACCTGATTCACCACGTGTTCATGTTCCTGTTCCTTCCCAAGCTGATCCTATCCCTCTTTGTTCACCATTACAACGAGGCAATAGTCGTAGAGTTCTTGCCAAGAGGGACTTTATGAGTCATATAGAAGAGCTTGAAAAGGAGAATGAAAAGGTTATAAACACAATTTTGAAGCTTGTGGGTGGATACCTTAAGGCTAATGTTGTGAATGAAGACCAGATTGCAGTGCCGGAAATACAAGCTGACGACAACTTGGTGAAAGACATGTTACCGTCGGACCTCATCGACAAACTTCGTTACAATGGGAAGCTGATGTTTCAGAATGAGTGCCGCAGTTTGTACAGCAGTTGTAGGAAGTTGTTTCTGAAGGAGTGTTTATCAAAACTCGGGTTGGAAGTTGAAGAGCTCAATGTGGAGGACTTTGACAAGATGGAGAAGATAGGGAGTTTGATAAAAGCTTTGAACATAACCGTGAGAATACTGTTTCCCAATGAAAGGATTCTCTGTGATCACGTATTCCTAGAGTCTTACAATGCAGATATCTCATTTGCTGAGGTTTGCACGGAATTGAGTGTCAGTCTGTTAAGATTTGTGAATACATTAGCAACTGAGAATCATCAATGGTCTTACCATCTGGTCCATGTCATTCCCAACGTGTTCAAGACTTTGATTGATCTGATTCCTATGTTCGATTCACTGTTTTATGGTCAGCTGTTTAGCGAATCACTCAGAAATGGTGCAATTCTTGTCGGGAAGAGACTGGGTGTTTTTGTTGAGTTGGAGAGTCTCATTCACCGAGAAGTGGCTAAGGAGACTGTTCCCAATGGTGGGATTCATCCAACAACCCACAGAGTGATGGATTATCTGAGAGAAGTTTTCACAAATGCTGAGATTTTCCCAATTAGAAGAGGAATATCTTCATTTTCAGATCAGGTAGCTAGGATAATAAAAGTTTTAGACACAAATTTGGAAGCCAAGTCCAAAAGCTACACAAACCCAGCATTAGGCCATGTTTTTATGATAAATAATTTGATGTTTTTACAATTTGGGGAAGATTATATATATGGAGAGATTTTAGGACAAGGTTGGTACAAGTCAAAGATCAACCAGCATATTGAACTCTATCAAAGAAGCTCGTGGGAGAAGATATTAGAGCTTTTGAAAATAAGCAGAAGAGAACTGCTAGCAGAGTCTATGGAAAAGAAGGTGAAATTGTTCAACCAGCAGTTCAATGAGATATGCAAAGCTCACTCTGAGTGGTTAATATTTGATGATGAGCTAAGGGGAGTTGTGGTAAAATCCGTAGAGAACACATTGTTGCCTACATATGGGACCTTTATTGGAATCATTCATGATGTTGTTGGTAAAGATGCTTATAAGTTCAATTGGTATGGAATTCAGAACATTCAAGATCGCTTGAGCCATTTGTTTTCTGTAAAAATTGCTGAGGGCTGA 1797 0.3934 MTSVYSYFVDTKVKGKPDVYSVVSNAAFAIMSLGLSTFSPFGFEVDLLYFFCGVLMVQLMKIKLWLIIVGGCFSYSLNILHSTLDTDQRSYDLLNITIDPRSQSQSQVSTAGVSPPDSPRVHVPVPSQADPIPLCSPLQRGNSRRVLAKRDFMSHIEELEKENEKVINTILKLVGGYLKANVVNEDQIAVPEIQADDNLVKDMLPSDLIDKLRYNGKLMFQNECRSLYSSCRKLFLKECLSKLGLEVEELNVEDFDKMEKIGSLIKALNITVRILFPNERILCDHVFLESYNADISFAEVCTELSVSLLRFVNTLATENHQWSYHLVHVIPNVFKTLIDLIPMFDSLFYGQLFSESLRNGAILVGKRLGVFVELESLIHREVAKETVPNGGIHPTTHRVMDYLREVFTNAEIFPIRRGISSFSDQVARIIKVLDTNLEAKSKSYTNPALGHVFMINNLMFLQFGEDYIYGEILGQGWYKSKINQHIELYQRSSWEKILELLKISRRELLAESMEKKVKLFNQQFNEICKAHSEWLIFDDELRGVVVKSVENTLLPTYGTFIGIIHDVVGKDAYKFNWYGIQNIQDRLSHLFSVKIAEG* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0898 598 PANTHER PROTEIN, PUTATIVE-RELATED 8 592 - -
Vra6g0898 598 SUPERFAMILY Cullin repeat-like 184 591 IPR016159 -
Vra6g0898 598 Gene3D Exocyst complex component Exo70 141 596 - -
Vra6g0898 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 592 IPR004140 GO:0000145|GO:0006887
Vra6g0898 598 Coils Coil 149 169 - -
Vra6g0898 598 Pfam Exo70 exocyst complex subunit 265 587 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0898 Vra-Chr6 9427485 9429281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0898 184 591 EXO70 exocyst subunit family AT5G58430 40.225 1.42e-86 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0898 - - vra:106763398 1189.87