Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0895 ATGCTCATCGAAATACATAGTAGGCTGCTGCAGCCAAAGGTATGGAGATTTGTGTGTTTTGTTTCATCGATTGTTGGACTTGTCTGTTATGCTTTGAGCTCTTCTTTCAATCATTTATGTGGCGCTTGGAAGTGGTGGAAGATCTTTTTCTATATTAGTTTTAGTTTCTTCATCTCCCTTTCCACCTTATTTGCAAAGGCATGGGAGTGCTCCAACTCTCCCTGTTTGGAGGCTCACACAGCCTTCTTGGTTTTGCTCATAACTTCTGTGTACACCTTTTTCTATGATAAACAAGTCACAGAGAAACCAGATGCATATGGTCTGGTTTCGTGTGCAGCATTCGCTATCATGTCACTAGCCTTGTCAAGACTCAGTCACTTTGGATTTAAGGTCGATCTTCTATATTTTTTCAGTGGATTTCTGACAGTACAACTCATGAAAATAAAATTATGGTTAGTAATTGTAGGAGGAGGTTTCAGTTATTCCCTCATCATTCTTCGTTCGGCCTTGGATGCTTCAGCCAGAACTGGGTATGTTGGACTCCATGTCAATGATCACGTAGTCATTGAAATTGGTTCACACTCACAAAGAACAAGCCGCAATTTTTCACAAGTTGGTTCACCTCAAATTATTACCACTGTTGTTGGTCATTCCCTCGTCATGCCGCAAGACGTTGTTGTCTCTGAAGGAGATGAGGATTCAGGATTCATGGTCACTCAAGGCAAAGATGACAGTAACAAAAGTATCATGGCACGATTCATGGAATGTATAGAGGTGCTTAAGAAGGAGAATGAGACCCTTATCAGCACAATTTCCAAGCACGTAGATGGATACCTTAAAGCTAATGTGGTCAACAAGATTCCAACGGTGGAACTCCATGCTGACAACAACTTGGTGGTTGATGCATTGCCTGCTGGAATCACCAACGACCTTCACGAAGCCGTGTGGCTGATACTGGCTGAAGGGTTTGAGGAGGATTGTTGCAGAGCATACTATACTTGCCGAAGGGAGTTTCTGAAAAAGTGTTTATGGACTTTTTGGTTGCAAATGCAAGAGCTTTGCATGAAGGACATTGATAAGATGGAGAAGATTGAGAGNTGGTTAACAAAGGTTTTGTATGTAGTTGATAGTGTACTCCTTCCCAATGAAAGGACACTCTGTGATCGCATCTTTAAAGGAGTCTATTCCCCTGGGGATTTTGCTTTCACTATGGTTTGTAGAGAATTGAATATTTGTTTGGTTCGCATTGCCAATCACTTGGCAACTATTCTAGAGTGTAAAAATTTTACATATTATGAGGGTGGTGAGCTTCATCCTAATATCTGTGAATTGATGCACAAATTTCGTTATGTTTGCACACAAAGGGATGATAGATCTAGGCAAGGATTAGAAGAATACACCATGTTTGATAAGGAGGGAAAGCTTTCACCGTCAGTGAATGTGGTCAGGATAATAGCAACACCCTGA 1467 0.4117 MLIEIHSRLLQPKVWRFVCFVSSIVGLVCYALSSSFNHLCGAWKWWKIFFYISFSFFISLSTLFAKAWECSNSPCLEAHTAFLVLLITSVYTFFYDKQVTEKPDAYGLVSCAAFAIMSLALSRLSHFGFKVDLLYFFSGFLTVQLMKIKLWLVIVGGGFSYSLIILRSALDASARTGYVGLHVNDHVVIEIGSHSQRTSRNFSQVGSPQIITTVVGHSLVMPQDVVVSEGDEDSGFMVTQGKDDSNKSIMARFMECIEVLKKENETLISTISKHVDGYLKANVVNKIPTVELHADNNLVVDALPAGITNDLHEAVWLILAEGFEEDCCRAYYTCRREFLKKCLWTFWLQMQELCMKDIDKMEKIEXWLTKVLYVVDSVLLPNERTLCDRIFKGVYSPGDFAFTMVCRELNICLVRIANHLATILECKNFTYYEGGELHPNICELMHKFRYVCTQRDDRSRQGLEEYTMFDKEGKLSPSVNVVRIIATP* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0895 488 SUPERFAMILY Cullin repeat-like 253 423 IPR016159 -
Vra6g0895 488 Gene3D Exocyst complex component Exo70 236 453 - -
Vra6g0895 488 PANTHER PROTEIN, PUTATIVE-RELATED 13 453 - -
Vra6g0895 488 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 453 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0895 Vra-Chr6 9405685 9407151 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0895 286 421 EXO70 exocyst subunit family AT5G58430 37.324 5.66e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0895 - - vra:106763395 977.237