Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0894 ATGAACAATCTGACTTTCATACAACTAGAAACAAAGTTCTATGGATTGGTTCCTATTTTTAGTCAAGATTGGCTCCGGAAAATCACAACAAAATTTCAGCAAAACCTCGAACTCTATCTGAAAAGCTCGTGGAATAAGATTGTGGACTTTCTGAAGTTTGATATTTGTGAATCAGAGACTAGTGTTGCGGTTGGGTTACTGAAAGACAGGATAAATTCGTTCAACGAACACTTTGATGAGATATGCAATGTTCAATCCACATGGTTTGTGTATGATGAAGATTTAAGAAAACATATTGTAAAATCCATAGAAGACATGTTGTTGCCAGCATATGGAAACTTCATTGGAAGGTTGCAGAATTTTCTTGGCAAACACAGTTATAATTATGTTAAGTATGGAATGTTTGACGTCCAAGATCGAATCCGCAATCTGTTTGTTGTGATGAAGAGTAAAAATCTGTTTCTGAAACAAAAGTGA 477 0.3501 MNNLTFIQLETKFYGLVPIFSQDWLRKITTKFQQNLELYLKSSWNKIVDFLKFDICESETSVAVGLLKDRINSFNEHFDEICNVQSTWFVYDEDLRKHIVKSIEDMLLPAYGNFIGRLQNFLGKHSYNYVKYGMFDVQDRIRNLFVVMKSKNLFLKQK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0894 158 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 146 IPR004140 GO:0000145|GO:0006887
Vra6g0894 158 Gene3D Exocyst complex component Exo70 1 152 - -
Vra6g0894 158 SUPERFAMILY Cullin repeat-like 1 145 IPR016159 -
Vra6g0894 158 PANTHER PROTEIN, PUTATIVE-RELATED 1 146 - -
Vra6g0894 158 Pfam Exo70 exocyst complex subunit 1 141 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0894 Vra-Chr6 9405143 9405619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0894 1 145 EXO70 exocyst subunit family AT5G58430 40.816 1.55e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0894 - - vra:106763394 325.479