Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0893 ATGCTCAGCAAAATTGGGAGTTGGCTACATCAGCCAAAGGTATGGAGATTAGTGTGTTTTGCTTCATCTATCGTTGGCCTTATCTGTTATGCTTTGAGCTCCTCTTTCAATCTTTTACTTGGAAATTGGACCTGGTGGAAGTTACTTCTTTACATTACTTTTAGTTTTTTAATTTCCCTTTCCACCTTGTTTGCAAAGACATGGGAATACTCCAACTCTCGCTGTTTGGAAGCTCACACAGCATTTTCTGTTTTGCTTATCACTTCTGTATACTCCTTTTTCCTTGATAAAGATCTGAAACAGAAAACCGATACCTATAGTCTGCTTTCTTGTGTTGCTTTTGCTATCATGTCTCTAGGCTTGTCTAGGCTGAGTCAGTTAGGATTTGAGGTTGATCTCTTGTATTTTTTCTGTGCACTTCTGACGATACAACTCATGAAAATAAAACTGTGGCTAGTCACTGTTGGAGGAGTTTTCAGTTACTCCCTCATCCTTCTTCGTTGCAATTTGGATCCTCAACCAAGAAGTGGGTATCATGGACTTCAACACCAAGATCATGTAATGCTTGAAATTGATTCTCCACAACCACATGGAACCAGTAATAGTGTTACTCAAGTGGATTCAACCCAAACAATTATGGCTAGTTCACAGCCATACCCTGTCATTGATATGGTCTGGCCTTCAAGAGGATCAAGGCACAGTGCTTCTCAAGTAGTTTCACCTCAGGAGGGTGGTGCTGGTGGTGCCCCTCCAGAAAACATTTATGGTTCCAAGGAATGCTTCATGGGTTGTATAGAGGCTCTTAAGAAGGAGAATGGGAGCGTTATCATAGCAATTTTCATGCATGTAGACAAATACCTTAAAGCTAGTGTTCTTAGTGAGGAGCAGATTTCAGTGCCAGAATATCATGGCGACGACAACATGGTGGTGGATTCATTGTCGTCAGGAATGATCAACAAGCTTCGTGAAAATGTACAGAAGATGGTGTCAGACGGATTTTTGAAGGAATGCTTGCACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGTCTCTGGGCATTAGGGTTGCAGGTTCAAGAGCTCAACGAGGAGGACATTAACAAGTCGGAGAAAATTGAGATGCTGATAAAAGCTATGAACATAGCTGCGAGGATACTCTTTCCCAATGAAAAAAGACTCTTCATTCGTGTATTTAGCGGCTCCATTCGCAATGTGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGTTACCATTCTGCTGAAGTCTGCCCTTGCCTTGGCAACTTGGAGCCATTTCATGCGCAACACATTGCAGGAATTGATACAAGACTTTGAATCATTTACATCAGGCAGAAATATTATCGTACGATTGATAAGGCGTAGATTGTGCATTTATGAGGCTTTGGAAGATGTATCACTCATTACCGGGGGCGGGATTCATCCTATTACCCATGCAGTGATGTATTATATTTATTCTATCAACAGAAATAGGGAAATTAGTAAACTTAGCCAAGATTTGAAAGAGGGAAAGATTCCATCATCTGTGCACAGGGCCAGAGTGAGAATTCTGTTAGAGAGTAAGTCCAAATATGGTAATAAGCTTACACTGATGTACTACATTAAATCTCTAAACCAAAGTAGGGAGAGTAAACTTAGACAAGGTTTAGAAGATGAAATGCTTTCACCTGTGTACCTGGACAGGATGACAGAGCTTTTAGAGAGCTGTTTGGTAGCCAACTCCAAAAATTGCAAAAACCCTTCTTTGGGTCATGTTTTCATCATGAATAATCGGAGATTCATAGAAGTAGAGACAAGACTAAATGGACTGGGACATTTTTTTGGAGATGACTGGCTCCACAAAAACACAACAAAGATCCAAGAAAACCGTGAGCTCTATCTAAGAAGCTCATGGAATAAGATTGTGGACCTTTTGAAGGTAGACATCAATCAACTAGAGACTAGTGTTGTAGCCGAGTTGATTAAAGACAACCTTTATTGGTTCAACGAACTCTTTGATGAGGCATGCAACATTCAGTCTACATGGCCTGTCTGTGATGAGGAGCTAAGGGAACAAATAATAAAATCCATAGAAAACATGTTGTTGCCAGCATATGGAAGTTTCCTTGGCACATTTGAGGAATTTTTTGGGAAGTATGCTTATAAATACATTAAGTATGGAATGTTTGAGGTTCAAGATCGACTCAGCAAATTGTTTCTTGTGAGGGAGTAG 2238 0.4053 MLSKIGSWLHQPKVWRLVCFASSIVGLICYALSSSFNLLLGNWTWWKLLLYITFSFLISLSTLFAKTWEYSNSRCLEAHTAFSVLLITSVYSFFLDKDLKQKTDTYSLLSCVAFAIMSLGLSRLSQLGFEVDLLYFFCALLTIQLMKIKLWLVTVGGVFSYSLILLRCNLDPQPRSGYHGLQHQDHVMLEIDSPQPHGTSNSVTQVDSTQTIMASSQPYPVIDMVWPSRGSRHSASQVVSPQEGGAGGAPPENIYGSKECFMGCIEALKKENGSVIIAIFMHVDKYLKASVLSEEQISVPEYHGDDNMVVDSLSSGMINKLRENVQKMVSDGFLKECLHVYSNWRREFLKESLWALGLQVQELNEEDINKSEKIEMLIKAMNIAARILFPNEKRLFIRVFSGSIRNVEFHFRELCTELVTILLKSALALATWSHFMRNTLQELIQDFESFTSGRNIIVRLIRRRLCIYEALEDVSLITGGGIHPITHAVMYYIYSINRNREISKLSQDLKEGKIPSSVHRARVRILLESKSKYGNKLTLMYYIKSLNQSRESKLRQGLEDEMLSPVYLDRMTELLESCLVANSKNCKNPSLGHVFIMNNRRFIEVETRLNGLGHFFGDDWLHKNTTKIQENRELYLRSSWNKIVDLLKVDINQLETSVVAELIKDNLYWFNELFDEACNIQSTWPVCDEELREQIIKSIENMLLPAYGSFLGTFEEFFGKYAYKYIKYGMFEVQDRLSKLFLVRE* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0893 745 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 742 IPR004140 GO:0000145|GO:0006887
Vra6g0893 745 SUPERFAMILY Cullin repeat-like 293 741 IPR016159 -
Vra6g0893 745 Pfam Exo70 exocyst complex subunit 378 738 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra6g0893 745 Gene3D Exocyst complex component Exo70 279 745 - -
Vra6g0893 745 PANTHER PROTEIN, PUTATIVE-RELATED 7 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0893 Vra-Chr6 9402156 9404393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0893 296 741 EXO70 exocyst subunit family AT5G58430 35.343 3.96e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0893 - - vra:106763388 962.6