Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0892 ATGCTCATCAAAATTTGGAGTTGGCTACATCAGCCAAAGGTATGGAGATTTGTGTGTTTTGTTTCATCTATCGTTGGCCTTATCTGTTATGCTTTGAGCTCCTCTTTCAATCATTTACTTGGAAATTGGACCTGGTGGAAGTTACTTCTTTACATTGTTTTCAGTTTTTTAATCTCCCTTTCCACCTTGTTTGCAAAGACATGGGAAAAATCCAACACTCGCTGTTTGGAAGCTCACACAGCATTCACTGTTTTGCTTATCACTTCTGTATACTCCTTTTTCCTTGATAAAGATCTGAAACAGAAAGCAGACGCCTATAGTCTGCTTTCTTGTGTTGCTTTTGCTATCATGTCTCTAGGCTTGTCTAGGCTCAGTCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGCACTTCTGACGGTACAACTCATGAAAATAAAACTGTGGCTAGTCACTGTTGGAGGAGTTTTCAGTTACTCCNTCATCGTTCTTCGTTCCAATTTGGATCCTCAACCAAGAAGTGGGTATCATGGACTTCAACACCAAGACCACGTAGTGCTTGAAATTGGTTCTCATTCACAACCACATGGAACCAGTAATAGTGTTACTCAAGTTGATTCAACCCAAACAATTATGGCTAGTTCACAACCACATCCAGTCATTGATATGGTCTGGCCTTCAAGAGGAATAAGGCACAGTGCATCTCAAGTAGTTTCACCTCAAGAGGGTGGTGCTGGTGATGCCCCTCCAGAAAACATTTATGGTACCAAGGAATACTTCATGGGTTGTATAGAGGCTCTTAAGAAGCAGAATGGGAGCGTTCTTATAGCAATTTCAATGCATGTAGACAAATACCTTAAAGCTAGTGTTCTTAGTGGGGAGCAGATTTCAGTTCCAAAATTGCATGGGGATGACAACATGGTGGTGGATTCATTGTCGTCAGGAATGATCATCAACCTTCGTGAAAGTGTACAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTGCACGTGTACAGTAATTGGCGGCGGGAGTTTCTGAAAGAGTGTCTCTGGGCATTAGGGTTGCAGGATCAAGAGCTCAACGGGGAGGACATTAACAAGTCGGAGAAGATTGAGAGGCTGATAAAAGCTATGAACATAGCCACGAGGATACTCTTTCCCAATGAAGAAAGACTCTTCAAGCGTGTCTTTAGGGTCTCCATTCTCAATGGGGACTTTCATTTCAGGGAACTTTGCACGGAATTGGCTACTAGTCTGCTGAACTCTGCCCTTGCCTTGGAAACTTGGGGCCATTTCTTGCGCAACACATTGCAGGAGTTGATACAAGAGTTTGAATCATTTACAACACTAATAAATATTGTAGTGCTCCTAATAAAGCAGAGATTGTGCATTTATGAGGCTTTGGAAGATGTATCACTCATTCCTGGTGGCGGGATTCATCCTATTACCCTTGAAGGGATGTACTGTATTTATTTGGTTTACAGAAATAGGGAAATTAGAAAACTTAGGCAAGATTTAAAGGAGGGAAGGATTCCAGCATCGTTGTACATAGACAAAGTGAGAATTTTGTTACAGAGTAGTTTGGATGAAAAGTCCAAAAATGGTAATAAGTTTGAAGTGTTGTACTACATTAAATCTCAACGCCGAAGTAGGGAGAATAAACTTAGACTAGGTTTAGATGAAATGATTTCACCTGTGTTGATTTACAGGATGATAGAGCTTTTAGAGAGCAGTTTAGAAGCCAACTCCAAAAATTACAAAAATCCTTCTTTGGGTTATGTTTTCATCATGAACAACCGGAGATTCATTGAAGTAGAGACAAAACTGAATGGACTGGGAATTGCTTTTGGAGATGACTGGCTCCACAAAAACACAACAAAGTTCCAAGAAAACCTTGAGCTCTATCTAAGAAGCTCATGGAATAAGATTCTGGACCTTTTGAAGGTAGACATCAACCAACTAGAGCCTAGTGTTATAGCCGAGTTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGAGAACAAATAATAAAATCCATAGAAAACATGCTGTTGCCAGCGTATGGAAGTTTCCTTGGCACATTTGAGGAATTTGTTGGGAAGAATGCTTATAAATACATTAAGTATGGAATGTTTGAGGTTCAAGATCGACTCAACAAATTGTTTCTTTTAAGGGAGTAG 2250 0.4031 MLIKIWSWLHQPKVWRFVCFVSSIVGLICYALSSSFNHLLGNWTWWKLLLYIVFSFLISLSTLFAKTWEKSNTRCLEAHTAFTVLLITSVYSFFLDKDLKQKADAYSLLSCVAFAIMSLGLSRLSQLGFEVDLLYFFCALLTVQLMKIKLWLVTVGGVFSYSXIVLRSNLDPQPRSGYHGLQHQDHVVLEIGSHSQPHGTSNSVTQVDSTQTIMASSQPHPVIDMVWPSRGIRHSASQVVSPQEGGAGDAPPENIYGTKEYFMGCIEALKKQNGSVLIAISMHVDKYLKASVLSGEQISVPKLHGDDNMVVDSLSSGMIINLRESVQKMVSDGFEEECLHVYSNWRREFLKECLWALGLQDQELNGEDINKSEKIERLIKAMNIATRILFPNEERLFKRVFRVSILNGDFHFRELCTELATSLLNSALALETWGHFLRNTLQELIQEFESFTTLINIVVLLIKQRLCIYEALEDVSLIPGGGIHPITLEGMYCIYLVYRNREIRKLRQDLKEGRIPASLYIDKVRILLQSSLDEKSKNGNKFEVLYYIKSQRRSRENKLRLGLDEMISPVLIYRMIELLESSLEANSKNYKNPSLGYVFIMNNRRFIEVETKLNGLGIAFGDDWLHKNTTKFQENLELYLRSSWNKILDLLKVDINQLEPSVIAELMKDNLYWFNEHFDETCNIQSAWSVCDEELREQIIKSIENMLLPAYGSFLGTFEEFVGKNAYKYIKYGMFEVQDRLNKLFLLRE* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0892 749 SUPERFAMILY Cullin repeat-like 294 745 IPR016159 -
Vra6g0892 749 Gene3D Exocyst complex component Exo70 549 748 - -
Vra6g0892 749 Gene3D Exocyst complex component Exo70 259 548 - -
Vra6g0892 749 PANTHER PROTEIN, PUTATIVE-RELATED 6 746 - -
Vra6g0892 749 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 746 IPR004140 GO:0000145|GO:0006887
Vra6g0892 749 Pfam Exo70 exocyst complex subunit 475 742 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0892 Vra-Chr6 9395882 9398450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0892 297 745 EXO70 exocyst subunit family AT5G58430 35.197 2.81e-69 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0892 - - vra:106763388 1078.16