Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0889 ATGTCTCTAGGCTTGTCTAGGCTCAGTCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGCACTTTTGACGGTACAACTTATGAAAATAAAATTGTGGCTCGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCTTCAACCAAGAAGTGGGTATCAAGAACTTCAACACCAAGATCATGTAGTCGTTGAAATTGGTTCTCATTTACAACCACATGGAACCAGTAATAGTGTTACTCAAGCGGATTCAACCCAAACAATTATGGATAGTTCACAACCACACCGTGTCATTGATATGGTTTGGCCTTCAAGAGGAACAAGGCACAGTGCTTCTCAAGTAGTTTCACCTCAAGAGGGTGGTGCTGGTGGTGCCCCTCCAGAAAACATTTATGGTACCAAGGAATGTTTCATGGGTTGTATAGAGGCTCTTCAGAAGGAGAATGGGACCGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTCGTGTTCTTAGTGAGGAGCATAGTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTGGATTCATTGCCGTCAGGAATGATCAGCAAGCTTCGTGAAAGTGTACAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGTTTGCACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGTGTCTCTGGGCATCAGGGTTGCAAGATCAAGAGCTCAACGGGGAGGACATTAACAACTCGGAGAAGATTGAGATGCTGATAAAAGCTATGAACATAGCTGCGAGGATGCTCTTTCCCAATGAAAAAAGACTCTTCAATCGTGTCTTTAGGGGCTCCATTCTCAATGGAGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTACTGGTCTGCTGAACTCTGCCCTTGCTTTGGGAACATGGAGTCCTTACATGTGCAACACATTGAAGGAGTTGATACATGAGTATGAATCATTTACAATACGAAGAAATATTGTAGTGGTCCTGATAAGGCAGAGATTGTGCATTTATGAGGCTTTGGGAGACGTATCACTCATTCCTGGTGGCGGGATTCATCCCCTTACCCTTGAAGGAATGTACTTTATTTATTTGGTTTACAGAAATTGGGAAATTAGGAAACTTAGCCAAGATTTAAAGGAGGGAAAGATTCCATTATCTGTGTACAAAGACAAAGTGAGAATTCTGTTAAAGAGTAGTTTGGACGACAAGTCCAAAAATGGTAATAACCGTGAAGTGGTGTACTACATTAATTCTCGACACCAAAGTAGGGAGGATAAACTTAGAGTAGGTTTAGATGAAATGATTTCACCAGTGTTGATTTACAGGACGATAGAGCTTTTAGAGAGCAGTTTAGAAGTCAACTCAGAAAATTACAAAAACCCTTCTTTGGGTTATGTTTTCATCATGAACAACCGGAGATTCATTGAATTAGAGGCAAAACTGAATAGACTGGGACCTGCTTTAGGAGATGACTGGCTCCACAAAAACATAACAAAGTTCCAAGAAAACCTTGAGCTCTACCTAAGAAGCTCATGGAATAAGATTTTGGACTTTTTGAAGGTAGACATCAACCAACCAGAGCCTAGTATTACAGCCGAGCTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGACTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGAACAAATAATAAAATCCATAGAAAACATGCTGTTGCCAGCGTATGGAAGTTTCCTTGGAACATTTGAGGAATTTGTTGGGAAGAATGCTTATAAATACATTAAGTATGGAATTTTTGAGGTTGAAGATCGACTCAACAAATTGTTTCTTTTAAGGGAGTAG 1902 0.4106 MSLGLSRLSQLGFEVDLLYFFCALLTVQLMKIKLWLVTVGGAFSYSLILLRSNLDLQPRSGYQELQHQDHVVVEIGSHLQPHGTSNSVTQADSTQTIMDSSQPHRVIDMVWPSRGTRHSASQVVSPQEGGAGGAPPENIYGTKECFMGCIEALQKENGTVIRAISMHVDKYLKARVLSEEHSSVPELHGDDNMVVDSLPSGMISKLRESVQKMVSDGFEEECLHVYSNWRREFLKECLWASGLQDQELNGEDINNSEKIEMLIKAMNIAARMLFPNEKRLFNRVFRGSILNGEFHFRELCTELATGLLNSALALGTWSPYMCNTLKELIHEYESFTIRRNIVVVLIRQRLCIYEALGDVSLIPGGGIHPLTLEGMYFIYLVYRNWEIRKLSQDLKEGKIPLSVYKDKVRILLKSSLDDKSKNGNNREVVYYINSRHQSREDKLRVGLDEMISPVLIYRTIELLESSLEVNSENYKNPSLGYVFIMNNRRFIELEAKLNRLGPALGDDWLHKNITKFQENLELYLRSSWNKILDFLKVDINQPEPSITAELMKDNLYWFNEHFDETCNIQTAWSVCDEELREQIIKSIENMLLPAYGSFLGTFEEFVGKNAYKYIKYGIFEVEDRLNKLFLLRE* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0889 633 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 630 IPR004140 GO:0000145|GO:0006887
Vra6g0889 633 Gene3D Exocyst complex component Exo70 141 632 - -
Vra6g0889 633 SUPERFAMILY Cullin repeat-like 182 629 IPR016159 -
Vra6g0889 633 PANTHER PROTEIN, PUTATIVE-RELATED 1 630 - -
Vra6g0889 633 Pfam Exo70 exocyst complex subunit 359 626 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0889 Vra-Chr6 9361628 9364250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0889 190 629 EXO70 exocyst subunit family AT5G58430 34.737 3.24e-69 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0889 - - vra:106763388 1259.59