Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0888 ATGTCTCTAGGCTTGTCTAGGCTGAGCCAGTTAGGATTTGAGGTTGATCTCCTCTATTTTTTCTGTGGACTTCTGACCGTACAACTCATGAAAATAAAACCGTGGTTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCTTCAACCAAGAATTCGGTATCATGGACTTCAACACCAAGATCATGTAGTGATTGAAATTGGTTCTCATTCACAACCACAAAGAACCATTAATAGTGTTACTCAAGTGGATTCAACCCAAACAATTATAGCCAGTTCACAACCACACCCTGTCATTGATATAGTCTGGCCTTCAAGAGGAATAAGACAATATGCTTCTCAAGTAGTTTCACCTCAAGAGGGTGGTACTGGTGGTGCCCGTCCAGAAAACATTTATGGTACCAAGGAATGCTTTATAGGTTGTATAGAGGCTCTTCAGAAGGAGAATAGGAGCGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTAGTGTTCTTAGTGAGGAACAGATTTCAGTGCCAGAATTGCATGGCGACGACAACATGGTGGTTGATTCATTGTCGTCAAGAATGATCGGCAAGCTTCGTCAAAGTGTACAGAAGATGGTGTCAGATGGATTTGAGGAGGAATGCTTGCACGTGTACAGTAATTGGCGGAGGGGGTTTCTGAAAGAGAGCCTCTGGGCATTAGGGTTGCAGGTTCAAGAGCTCAACGGGGAGGACATTAACAAGTTGGAGAAGGATGAGAGGCTGATAAAAGCTATGAACATAGCTGCGAGGATACTCTTTCCCAATGAAAAAAGACTCTTCATTCGTGTCGTTAGCGGCTCCATTCGCAATGGGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTACTGGTCTGCTGAACTCTGCCCTTGCCTTGGCAACATGGAGTCTTTTCATGCGCAACACATTGCAGGAGTTGATACATGAGTTTGAATCATTTACAATACTAAGAAATATTGTAGTGGTCCTGATAAGGCAGAGATTGTGCATTTATGAGGTTTTGGAAGATGTATCACTCATTCCTGGTGGCGGGATTCATCCCCTTACCCTTGAAGGGATGTGCTTTATTTATTTGGTTTACAGAAATAGGGAAATTAGGAAACTTAAGCGAGATTTAAAGGAGGGAAAGATTCCAGCATCTATGTACATAGACAAAGTGAGAATTCGTTTAAAGTGTAGTTTGGACCATAAGTCCAAAAATGGTAATAAGTTTCATGTGATGAACTACAATGAATCTCCACACCAAAGTTTCCTTGGCACATTTGAGGAATTTGTTGGGAAGCATGTTTATAAATACATTAAGTATAGAAAGTCTGAGATACATGATCGACTCAGCAAATTGTTTCTTTTAATGGAGTAG 1425 0.4133 MSLGLSRLSQLGFEVDLLYFFCGLLTVQLMKIKPWLVTVGGAFSYSLILLRSNLDLQPRIRYHGLQHQDHVVIEIGSHSQPQRTINSVTQVDSTQTIIASSQPHPVIDIVWPSRGIRQYASQVVSPQEGGTGGARPENIYGTKECFIGCIEALQKENRSVIRAISMHVDKYLKASVLSEEQISVPELHGDDNMVVDSLSSRMIGKLRQSVQKMVSDGFEEECLHVYSNWRRGFLKESLWALGLQVQELNGEDINKLEKDERLIKAMNIAARILFPNEKRLFIRVVSGSIRNGEFHFRELCTELATGLLNSALALATWSLFMRNTLQELIHEFESFTILRNIVVVLIRQRLCIYEVLEDVSLIPGGGIHPLTLEGMCFIYLVYRNREIRKLKRDLKEGKIPASMYIDKVRIRLKCSLDHKSKNGNKFHVMNYNESPHQSFLGTFEEFVGKHVYKYIKYRKSEIHDRLSKLFLLME* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0888 474 PANTHER PROTEIN, PUTATIVE-RELATED 1 422 - -
Vra6g0888 474 SUPERFAMILY Cullin repeat-like 178 421 IPR016159 -
Vra6g0888 474 Gene3D Exocyst complex component Exo70 137 428 - -
Vra6g0888 474 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 422 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0888 Vra-Chr6 9346689 9348113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0888 181 386 EXO70 exocyst subunit family AT5G58430 35.443 1.17e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0888 - - vra:106763387 944.11