Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0886 ATGTCTCTAGGCTTGTCTAGGCTGAGTCATTTAGGATTTGAGATTGATCTACTGTATTTCTTCTGTGGACTTTTGACCGTACAACTCATGAAAATAAAACTGTGGCTAGTCACTGTTGGAGGAGCTTTCAGTTATTCCCTCATCCTTCTTCGTTCCAATTTGGATCCTGCACCAAGAAGTGAGTATCATGGACTTCAACACCAAGATCATGTAGTACTTGAAATTGGTTCTCATTCAGAACCACAAGGAACCAGTAATAGTGTTACTCAAGGCACAGTTTCACCTCAAGAGAGTGGTACTGGTAGTGCTCCTCCAGAAAACATTTATGGTACCAAGGAATGCTTCATGGGTTGTATAGAGGCTCTTAAGAAGAAAAATGGGAACGTTATCAGAGCAATTTCCATGCATGTAGACAAATACCTTAAAGCTGGTGTTCTTAGTGAGGAGCAGATTTCAGAACCAGAATTGCATGGCGATGACAACATGGTGGTGGATTCATTGTCGTCAGGAATGATCATCAAGCTTAGTGAAAGTGTACAGAAGATGGTGTCAGATGGATCTGAGGAGGAATGCTTGAACGTGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGTATGTGGGCATTAGGGTTGCAAGATGAAGAGCTCAACGGGGAGGATAGTAACAAGTCGGAGAAGATTGAGAGGCTGATAAAAGCTATGAACATAGCTGTGAGGATACTCTTTCCCAATGAAAAAAGACTCTTCAATCGTGTCTTTAGCCGCTCCATTCCCAATGGGGAGTTTCATTTCAGGGAACTTTGCACGGAATTGGCTACTAGTCTGCTGCAATCTGCCCGTGCCTTGGCAACTTGGAGCCATTTCATGCGCAACACATTGCAGGAGTTGATACAAGACTTTGAATCATTTACAACACCATTAAATATTGTAGTGGTCCTGATAAGGCAGAGATTGTGCATTTATGAAGCTTCGGAAGATGTATCACTCATTCCCGGTGGCGGGATTCATCCTATTACCCTTGAAGGGATGTACTGTACTTATTCGGTTTACAGAAATAGGGAAATTAGGAAACTTAGCCAAGATTTAATGGAGGGAAAGATTCCAGCATCTGTGTACATAGACAAAGTGAGAATTCTGTTGAAGAGTAGTTTGGACGATAAGTCCAAAAATGGTAATAAGCTTGAAGTGATGTACTACATTAAATTTCTATACCAAAGTAGGGAGAATAAAGTTAGACTAGGTTTAGGTGAAATTATTTCACCTGTGTGTATTTACAAGATGATAGAGATTGTAGAGAGCAGTTTAGAAGCCAACTCGAAAAATTACAAAAACCCTTCTTTGCGTTATGTTTTCATCATGAACAACCGGCGATTCATTGAAGTAGAGACAAAACTGAATGGACTGAGACTTTCTTTTGGAGATGACTGGCTCTACAAAAACACAACAAAGCTACAAGAAAACCTTGAGCTCTATCTAAGAAGCTCATGGAATAAGATTCTGGACCTTTTGAAGGTAGACATNAANCAACNAGAGNCTAGTGTTNTAGCCGAGTTGATGAAAGACAACCTTTATTGGTTCAACGAACACTTTGATGAGACATGCAACATTCAGTCTGCATGGTCTGTCTGTGATGAGGAGCTAAGGGATCAAGTGATAAAATCCATAGAAAACATGTTGTTGCCAGCTTATGGAAGTTTCCTTGGCACATTTGAGCAACTTGTTGGGAAGCATGCTTATAAATACATTAGGTATGGAATGTTTGAGGTACAAGATCGACTCAACAAATTGTTTCTTCTAAGGGAGATGAATCCGTTGCTGGAAGAGAAGGAATGA 1836 0.4041 MSLGLSRLSHLGFEIDLLYFFCGLLTVQLMKIKLWLVTVGGAFSYSLILLRSNLDPAPRSEYHGLQHQDHVVLEIGSHSEPQGTSNSVTQGTVSPQESGTGSAPPENIYGTKECFMGCIEALKKKNGNVIRAISMHVDKYLKAGVLSEEQISEPELHGDDNMVVDSLSSGMIIKLSESVQKMVSDGSEEECLNVYSNWRREFLKESMWALGLQDEELNGEDSNKSEKIERLIKAMNIAVRILFPNEKRLFNRVFSRSIPNGEFHFRELCTELATSLLQSARALATWSHFMRNTLQELIQDFESFTTPLNIVVVLIRQRLCIYEASEDVSLIPGGGIHPITLEGMYCTYSVYRNREIRKLSQDLMEGKIPASVYIDKVRILLKSSLDDKSKNGNKLEVMYYIKFLYQSRENKVRLGLGEIISPVCIYKMIEIVESSLEANSKNYKNPSLRYVFIMNNRRFIEVETKLNGLRLSFGDDWLYKNTTKLQENLELYLRSSWNKILDLLKVDXXQXEXSVXAELMKDNLYWFNEHFDETCNIQSAWSVCDEELRDQVIKSIENMLLPAYGSFLGTFEQLVGKHAYKYIRYGMFEVQDRLNKLFLLREMNPLLEEKE* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0886 611 Gene3D Exocyst complex component Exo70 111 604 - -
Vra6g0886 611 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 600 IPR004140 GO:0000145|GO:0006887
Vra6g0886 611 Pfam Exo70 exocyst complex subunit 326 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra6g0886 611 SUPERFAMILY Cullin repeat-like 147 598 IPR016159 -
Vra6g0886 611 MobiDBLite consensus disorder prediction 78 105 - -
Vra6g0886 611 MobiDBLite consensus disorder prediction 76 105 - -
Vra6g0886 611 PANTHER PROTEIN, PUTATIVE-RELATED 1 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0886 Vra-Chr6 9326225 9328941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0886 150 598 EXO70 exocyst subunit family AT5G58430 35.052 1.54e-65 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0886 - - vra:106763388 957.977