Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0885 ATGTCCGAAAACGGAGAAGAGAAGTTACTTGCTGTGGCGCGGCACATAGCGAAGACGCTGGGCCACAACAACACCATGTCTGATGACATTTTCCAAATATTGTCCAACTTCGATGGAAGGTTCTCGCGAGAGAATCTTTCGGAAAAGGGCGCAGATGCGGATTCCAGAGCCTGCGCCGCACTCGATCATTCCCTCAAATCCCTAGACCACCGGATCTCTCACCACGTCTCCTCCGACCGTCCAATTTGGGCCGACGCTGCTCACGCCGCTGCCTTCCTTGACGCCGTGGACGAGCTCGTCGCTGTTGTTGCCGAGTGGAACCACCTCGCCTCCGACAAGGCCGTCGCCGCGTGCCTCGTACGGGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCTGGAGGACGAGTTCCGCACGCTCATGGAGCGCGGCGGCGAGTCTTTTGGCCTTACTAGGAGCTACCGCAACGGTGAGTCGACTGAAAACATGCCGTTTGAGTCGGAGGAAGAAGACGAGGAGGAAGACGAAGGGAGAAACGGGGGAGACGAGGAGCAGATTCCGGTGGCGCTGCCGGTCACGGACTTCGACATCGTCATCGACGCGCTGCCAGCGGGGACGATCAACGACCTCCACGAGATCGCGAAGCGAATGGTGGCCGGAGGGTTCGGTAAGGAGTGTTCGCACGTGTACAGCAGTTGCCGGAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTACAGAAGCTCAGCATCGAGGACGTTCACAAGATGACGTGGCAGGACCTTGAAGATGAAATTGAGAAATGGATTAAAGCCTCCAACGTCGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGTGACCGCGTCTTCTTCGGATTCGCCTCCGCCGCGGATTTTTCATTCATGGAGGTTTGTCGCGGATCCGCGATTCAGTTGCTGAATTTCGCGGACGCCGTCGCGATCGGTAGCCGGTCTCCGGAACGGCTGTTCAGAATCCTTGACGTGTTCGAGACGCTTCGTGACCTAATTCCCGAATTTGAGGCCCTGTTTTCTGATCAATTCAGCGTCTCGCTCAGGAACGAAGTGATTACAATTTGGAAAAGGCTGGGGGAATCAATTAGGGGCATTTTTATGGAGCTGGAGAATTTGATTCGCCGAGATCCGGCGAAGACGGCAGTTCCCGGTGGCGGTCTGCACCCAATAACTCGCTACGTGATGAACTACCTCCGAGCGGCGTGCCGGTCGCGGCAGAGCTTGGAGCAGGTTTTTGAAGACTACGGGTTGAAAGAGTACCCGAAGCTTGATGATAGAGTCCACTCTTCATCTTCTCTATCAGTGCAAATGGATTGGATTATGGAGCTTTTAGAGAGCAATTTGGAAGCGAAGTCGAAGATTTACAAAGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGGAGGTATATTGTTCAAAAGGCCAAAGATAGTGAACTAGGAACCCTCTTGGGAGATGATTGGATCAGAAAACATGCTGCAAAAGTTCGACAATTCCATGCGCACTATCAAAGAAGCTCGTGGAGTAGGCTATTGGGGAGTCTGAAGCTGGATAGTACTGTCTCACTGCCCCCTAATGCCTTAGCAAAGTCAATGAAGGAGAAGCTCAAGTGGTTTAACACAGTGTTTGATGATATTTGCAAGGAACAATCTTCCTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAAAATTTCTCTTGAGAAATTCTTGTTGCCTGCTTATGGAAACTTCATTGGGAGGTTCGAGAATGTTCCAGAAATCGGTAAGCATGCTGATAAGTATATCAAGTATGGAACAGAGGATATTCAAGCCAAACTCAACGAATTGTTTCAGGGATCAAGTGGTAACCGAAAGTGA 1908 0.5183 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGADADSRACAALDHSLKSLDHRISHHVSSDRPIWADAAHAAAFLDAVDELVAVVAEWNHLASDKAVAACLVRAEDMLQHAMFRLEDEFRTLMERGGESFGLTRSYRNGESTENMPFESEEEDEEEDEGRNGGDEEQIPVALPVTDFDIVIDALPAGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEDVHKMTWQDLEDEIEKWIKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQFSVSLRNEVITIWKRLGESIRGIFMELENLIRRDPAKTAVPGGGLHPITRYVMNYLRAACRSRQSLEQVFEDYGLKEYPKLDDRVHSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKAKDSELGTLLGDDWIRKHAAKVRQFHAHYQRSSWSRLLGSLKLDSTVSLPPNALAKSMKEKLKWFNTVFDDICKEQSSWFVFDEQLREEIKISLEKFLLPAYGNFIGRFENVPEIGKHADKYIKYGTEDIQAKLNELFQGSSGNRK* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0885 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 628 IPR004140 GO:0000145|GO:0006887
Vra6g0885 635 Gene3D Exocyst complex component Exo70 81 635 - -
Vra6g0885 635 MobiDBLite consensus disorder prediction 163 180 - -
Vra6g0885 635 Pfam Exo70 exocyst complex subunit 269 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra6g0885 635 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 628 - -
Vra6g0885 635 MobiDBLite consensus disorder prediction 150 184 - -
Vra6g0885 635 SUPERFAMILY Cullin repeat-like 83 627 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0885 Vra-Chr6 9321630 9324043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0885 1 635 EXO70 exocyst subunit family AT5G58430 70.079 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0885 K07195 - gmx:100803694 1093.95