Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0872 ATGGTTGACAGCTTTATAGACGTCGAACGTGTCACTGAACCGACGTTTAAGGTGCCCTTAGACGTTGTGTATGCTGGCTGTAACAGGAAAGTTAATCACTTATTCAATGATGCCATGGAGAATGACACTCGATTGATCTCTAGTTTGATGATTGAGAAGTGCAAGGGAACGTTCACAAGATTGAAGTCCTTGGTTGATGTTGGAGGAGGCACAGGGACCATGGCAAAGGCCATTGCAAAATCATTCCCAAAAATGCAATGCATTGTATTAGATCTCCCACATGTTGTTGCAGGCTTGCAAGGTGCTGAAAACCTAAAATATGTTGGAGGGGACATGTTTGAGGCTATTCCTCCAGCTGATTCCATTCTGTTGAAGTGGATAATGCATGATTGGAGTGATGAGGAATGCATGAAGATATTGAAGAAGTGCAAGGAAGCAATCAGAAAGGAAGGCAAGAAAGGAAAGGTGATCATCATAGAGACGGTGATGGATGATGAAAAGAGAGATGATGATGATGAATTTGTAGAAACCCAACTCTTGTTTGATATTTTAATGATGGGGTTCTTCGTCGAATCCTCCCATCAGACGTCTAAATCGCTAGAGTGTAGTGGAATGAAGATGATGTCAGACAGTATTGTGATATCTGAGAATTTGATCCAAGAACTCATCAAGAAGACCGTGGTGATCTGTCTTTTAGGAGTTTCTTTGAAGGAGACATGTATTGAGCTTACTATTTGA 738 0.4133 MVDSFIDVERVTEPTFKVPLDVVYAGCNRKVNHLFNDAMENDTRLISSLMIEKCKGTFTRLKSLVDVGGGTGTMAKAIAKSFPKMQCIVLDLPHVVAGLQGAENLKYVGGDMFEAIPPADSILLKWIMHDWSDEECMKILKKCKEAIRKEGKKGKVIIIETVMDDEKRDDDDEFVETQLLFDILMMGFFVESSHQTSKSLECSGMKMMSDSIVISENLIQELIKKTVVICLLGVSLKETCIELTI* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0872 245 CDD AdoMet_MTases 64 152 - -
Vra6g0872 245 PANTHER ORCINOL O-METHYLTRANSFERASE 24 189 - -
Vra6g0872 245 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 224 IPR016461 GO:0008168
Vra6g0872 245 PANTHER O-METHYLTRANSFERASE 24 189 IPR016461 GO:0008168
Vra6g0872 245 Gene3D Vaccinia Virus protein VP39 15 207 IPR029063 -
Vra6g0872 245 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 188 IPR029063 -
Vra6g0872 245 Pfam O-methyltransferase domain 27 185 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0872 Vra-Chr6 9107637 9109156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0872 24 225 Monolignol Biosynthesis Gene Families AT5G54160 36.190 4.08e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0872 - K16040 vra:106763376 471.47