Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0871 ATGGGAAAGGCCATTGCCGAATCCTTCCCTCAGTTGGAATGCATCGTATTTGATCTTCCACATGTTGTTTCTGGCTTGCAAGGAAGTGGAAACCTTAAATATGTTGGAGGGGACATGTTTGAGGCGATTCCTCCAACAGATGCCATTTTGTTGAAGTGGATATTACATGACTGGAACGATGAGGAGTGTGTGAGCATATTGAAGAAATGCAAGGAAGCTATATCTAAGAAAGGGAAAGAAGGGAAGGTGATAATCATAGACATTGTGATGGATACTGAAGTGAAAGATAAAGAATATGTTGAAACACAGCTCTTCTTTGATATGATGATGATGGTGTTGCTCAACGGAAAAGAGAGAAACGAGAAGGAATGGCTGAAATTGTTTTCCTCTGCTGGTTTCAATAACTACACAATAACTCCCGTTTTGGGCTCAAGGTCTCTCATTCAGATCTATCCATAG 459 0.4074 MGKAIAESFPQLECIVFDLPHVVSGLQGSGNLKYVGGDMFEAIPPTDAILLKWILHDWNDEECVSILKKCKEAISKKGKEGKVIIIDIVMDTEVKDKEYVETQLFFDMMMMVLLNGKERNEKEWLKLFSSAGFNNYTITPVLGSRSLIQIYP* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0871 152 Gene3D Vaccinia Virus protein VP39 1 152 IPR029063 -
Vra6g0871 152 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 148 IPR029063 -
Vra6g0871 152 PANTHER O-METHYLTRANSFERASE 1 152 - -
Vra6g0871 152 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 152 IPR016461 GO:0008168
Vra6g0871 152 Pfam O-methyltransferase domain 3 134 IPR001077 GO:0008171
Vra6g0871 152 PANTHER O-METHYLTRANSFERASE 1 152 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0871 Vra-Chr6 9100312 9101477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0871 5 152 Monolignol Biosynthesis Gene Families AT1G51990 40.667 1.91e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0871 - K16040 vra:106764465 310.457