Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0869 ATGCAAGAAATTATGGAATCCCATGACGCGAAACTACTGAGGGCTCAAACACACATATGGAATCATATTTTTAACTTCATAAATTCCATGTCCCTTAAGTGTGTTGTTGAGTTAGGCATAGCAGACATCATACACAACCATGGCCAACCCATCTCACTCTCAAACCTCATTGCTTCACTTCCAATTCATTCTTCCAAAACTCATTTCATCCCTCGCTTGATGCGAATCATGGTCCATTCTGGCTTCTTCTCTCAACTCAATCACACCGACAACGACCTTGAAGTCAAGTATGCACTCACTGATGCCTCTTTCCTTCTGCTTAAGAGCCATGAAATGAGTATGGCACCTTTCCTGCAGGCCATGCTTGATCCAGTTTTAACAAATCCATGGAATCAGTTTTCTAGTTGGTTCAAAAATGGTATTACTACACCCTTTGAAATGGCACATGGGAAATTGTTTTGGGAGTATGCTGGCAGTGATCCCAGAATTAACATCTTATTCAATGATGCTATGGCAAGTGATGCTAAACTAATCACTAGTTCAGTGATTGAGAAATGCAAAGGGGTGTTTATGGGATTGGAGTCATTGGTTGATGTTGGGGAAGGTACAGGAACCATGGGAAAGGCCATTGCCGAATCCTTCCCTCAATTGGAATGCATCGTATTTGATCTTCCACATGTTGTTTCTGGCTTGCAAGGAAGTGACAACCTTAAATATGTTGGAGGGGACATGTTTGAGGAGATTCCTCCAACAAATGCCATTTTGTTGAAGTGCATATTACATGACTGGAACGATGAGGAGTGTGTGAGAATATTGAAGAAATGCAAGGAAGCTATATCTAAGAAAGGGAAAAAAGGGAAGGTGATAATCATAGACATTGTGATGGATAATGAAGTGAAAGATGAAGAATATGTTGAAACACAACTCTTCTTTGATATGTTGATGGTGATGGTCCACGGAAAAGAGAGAAACAAAAAAGAGTGGGTTAAGCTGTTTTCCTCTGCTGGTTTCAATAACTACGATATAACTCCCGTTTTGGGCATAAGGTCTCTCATTCAGATCTATCCATAG 1071 0.4052 MQEIMESHDAKLLRAQTHIWNHIFNFINSMSLKCVVELGIADIIHNHGQPISLSNLIASLPIHSSKTHFIPRLMRIMVHSGFFSQLNHTDNDLEVKYALTDASFLLLKSHEMSMAPFLQAMLDPVLTNPWNQFSSWFKNGITTPFEMAHGKLFWEYAGSDPRINILFNDAMASDAKLITSSVIEKCKGVFMGLESLVDVGEGTGTMGKAIAESFPQLECIVFDLPHVVSGLQGSDNLKYVGGDMFEEIPPTNAILLKCILHDWNDEECVRILKKCKEAISKKGKKGKVIIIDIVMDNEVKDEEYVETQLFFDMLMVMVHGKERNKKEWVKLFSSAGFNNYDITPVLGIRSLIQIYP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0869 356 PANTHER ORCINOL O-METHYLTRANSFERASE 5 356 - -
Vra6g0869 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Vra6g0869 356 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Vra6g0869 356 Gene3D - 2 106 IPR036388 -
Vra6g0869 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Vra6g0869 356 Pfam O-methyltransferase domain 130 338 IPR001077 GO:0008171
Vra6g0869 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Vra6g0869 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 352 IPR029063 -
Vra6g0869 356 PANTHER O-METHYLTRANSFERASE 5 356 IPR016461 GO:0008168
Vra6g0869 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0869 Vra-Chr6 9054992 9056621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0869 30 342 Monolignol Biosynthesis Gene Families AT5G54160 32.500 9.85e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0869 - K16040 gmx:100807238 547.74