Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0864 ATGGAATCCCATGACGCCAAACTACTGAGGGCTCAAACACACATATGGAATCATATTTTTAGCTTCATAAACTCCATGTCCCTTAAATGTGTTGTTGAGTTAGGAATACCAGACATCATACACAACCATGGCCAACCCATCTCACTCTCAAACCTCATTGCTTCACTTCCAATTCACTCTTCCAAAACTCACTTCATCCCTCGCTTGATGCGAATCATGGTCCATTCTGGCTTCTTCTCTCAACTCAATCACACCGATAACGACCTTGAAGTCAAATATGCACTCACTGATGCCTCTTTGCTTCTGGTTAAGAGCCATCAAATGAGTATGGCACCTTTCCTGCAGGCCCAGCTTGATCCAGTTTTAACAAATCCATGGACTCAGGTTTCTAGTTGGTTCAAAAATGGTATTACTACATCCTTTGAAATGACGCATGGGAAATCGTTTTGGGAGTATGCTGGCAGTGATCCCAGAATTAATATCTTATTCAATGATGCTAGGGCAAGTGATGCTCAACTAATCACTAGTTGGGTGATTGAGAAATGCAAAGGGGTGTTCATGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGTACAGGAACCATGGGAAAGGCCATTGCCGAATCCTTCCCTCAGTTGGAATGCATTGTATTTGATCTTCCACATGTTGTTTCTGGCTTGCAAGGAAGTGACAACCTTAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTCCGGCCGATGCCATTTTGTTGAAGTGGATATTACATGCCTGGAGCGATGAGGAGTGTGTGAGAATATTGAAGAAATGCAAGGAAGCTATATCTAAGAAAGGCAAAGTAGGGAAGGTGATAATCATAGACATTGTGATGGATAATGAAGTGAAAGATGAAGAATATGTTGAAACACAACTCTTCTTTGATATGTTAATGATGGTGGTTCTCAACGGAAAAGAGAGAAACGAAAAAGAATGGGTTAAGCTGTTTTCCTCTGCTGGATTCAATAACTACGACATAACTCCCGTTTTGGGCATAAGGTCTCTCATTCAGATCCATCCATAG 1062 0.42 MESHDAKLLRAQTHIWNHIFSFINSMSLKCVVELGIPDIIHNHGQPISLSNLIASLPIHSSKTHFIPRLMRIMVHSGFFSQLNHTDNDLEVKYALTDASLLLVKSHQMSMAPFLQAQLDPVLTNPWTQVSSWFKNGITTSFEMTHGKSFWEYAGSDPRINILFNDARASDAQLITSWVIEKCKGVFMGLESLVDVGGGTGTMGKAIAESFPQLECIVFDLPHVVSGLQGSDNLKYVGGDMFEAIPPADAILLKWILHAWSDEECVRILKKCKEAISKKGKVGKVIIIDIVMDNEVKDEEYVETQLFFDMLMMVVLNGKERNEKEWVKLFSSAGFNNYDITPVLGIRSLIQIHP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0864 353 Pfam Dimerisation domain 26 74 IPR012967 GO:0046983
Vra6g0864 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 349 IPR029063 -
Vra6g0864 353 Gene3D - 1 102 IPR036388 -
Vra6g0864 353 Gene3D Vaccinia Virus protein VP39 103 353 IPR029063 -
Vra6g0864 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 353 IPR016461 GO:0008168
Vra6g0864 353 PANTHER ORCINOL O-METHYLTRANSFERASE 3 353 - -
Vra6g0864 353 PANTHER O-METHYLTRANSFERASE 3 353 IPR016461 GO:0008168
Vra6g0864 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Vra6g0864 353 Pfam O-methyltransferase domain 126 335 IPR001077 GO:0008171
Vra6g0864 353 CDD AdoMet_MTases 192 281 - -
Vra6g0864 353 SUPERFAMILY "Winged helix" DNA-binding domain 5 106 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0864 Vra-Chr6 8911622 8913503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0864 26 339 Monolignol Biosynthesis Gene Families AT5G54160 33.438 1.90e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0864 - K16040 gmx:100807238 563.918