Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0841 ATGGATCATAATTTGATCTCATTCTTACCAATTTTTCTATATTCATTGAGTTTCATACTTATTGTTTCACAGTTTCTAAAAGTGAGAAACAGATCCAAAAACTCAGTGAAAACATTGAAGCTTCCCCCAGGGCCATGGAAGCTACCTATCATTGGAAGCTTACATCATTTAGTTGGCTCTCAATCTTATCATCGCTTCAGAGAACTAGCCCAAAAGCATGGTCCTCTTATGCACCTACAACTTGGTGAGGTATCAACCGTTGTGGTTTCTTCTCCAGAACTGGCCAAAGATGTCCTGAAAACCTATGATGCCATATTTGCACAAAGACCCCATCATATTGGTGCAGATATCGTGTGTTACGGTTCCACTGACATTGTCACCTCAAATGGGGGGTACTGGAAGCAGCTAAGAAGAATATGCTCACAAGAGCTTCTAAGCAACACACGTGTGAGGTCATTTCGATCAATAAGAGAAGAAGAAGTGTTGAATTTAGTAAGATATATTGAGACCAACACTGGTTCTTGTGTGAACCTCAGTGAGAAAGTCTCATGCCTGACAAGTGCCGTCACTGCAAGGGCAGCTTTTGGTGAAAAATGCAAGGATCAAGAAGAGTTCATTTCCCTTGTCAAGAAACTTGTGAAAATTGCCGAAAGTTTAGTTATTCTTCACTTGTTCCCTTCTCACAAATGGCTTCATGTCATCGGTGGACAGAAACCTAAACTGGAAGAGTTGCATAGAAAATATGACGAAATAATTGGAAACATCATTAGAGAGACCGAAAAAAATATTGGTGATGTAGAGGGTAATAGTCTCCTTTCTGTTCTTCTAAATGTTAGAAATCAAGGTTCCCTCGAATATCCTTTGACAATCGACAACATCAAGGCTGTAATGTTGAACATTTTTGGGGGTGGAACTGATACATCAACTGCAACTATAGAATGGGCAATGTCAGAGATGCTGAAAAATCCAAAAGTAATGGCCAAAGCTCAAGAAGAAGTTAGAGGAGTTTTTGGTAGCAAAGGATACAGCAACGAAGAATCACTTGAGGAACTAAAATATTTGAAAGCAGTGATAAAAGAAACAATGAGATTGCACCCTCCTTTCCCTCTTCTTCATCCAAGAGAATGTAGAGAAACTTGTGAGGTAAAAGGTTATATGATACCTGCTGGGACCCAAGTGATGGTAAATGCATGGGCAATTGGAAGAGACCCTGATTATTGGAATGATCCAGAAAAGTTTAATCCTGAGAGATTCATTGATAGTCCAATTGATTATAAAGGTTCCCATCATGAATTCATTCCCTTTGGCGCTGGAAGGAGAATATGCCCTGGCATTTCTTTTGGGGTAATTACTATTGAACTTTGTCTTGCACAATTACTTTACTATTTTAATTGGAAACTTCCAATTGGAGACAAAGAAAACCTGGAAATGGCTGAAGCTTTGGGAGCCTTCTCGAGAAGGAAAACAGATCTAGTCTTAGTTCCTGTTTCTCATAATCCTCCTCCTATTTCATCAAACCTAAATTAA 1527 0.391 MDHNLISFLPIFLYSLSFILIVSQFLKVRNRSKNSVKTLKLPPGPWKLPIIGSLHHLVGSQSYHRFRELAQKHGPLMHLQLGEVSTVVVSSPELAKDVLKTYDAIFAQRPHHIGADIVCYGSTDIVTSNGGYWKQLRRICSQELLSNTRVRSFRSIREEEVLNLVRYIETNTGSCVNLSEKVSCLTSAVTARAAFGEKCKDQEEFISLVKKLVKIAESLVILHLFPSHKWLHVIGGQKPKLEELHRKYDEIIGNIIRETEKNIGDVEGNSLLSVLLNVRNQGSLEYPLTIDNIKAVMLNIFGGGTDTSTATIEWAMSEMLKNPKVMAKAQEEVRGVFGSKGYSNEESLEELKYLKAVIKETMRLHPPFPLLHPRECRETCEVKGYMIPAGTQVMVNAWAIGRDPDYWNDPEKFNPERFIDSPIDYKGSHHEFIPFGAGRRICPGISFGVITIELCLAQLLYYFNWKLPIGDKENLEMAEALGAFSRRKTDLVLVPVSHNPPPISSNLN* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0841 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vra6g0841 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 499 - -
Vra6g0841 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 Gene3D Cytochrome P450 35 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
Vra6g0841 508 Pfam Cytochrome P450 42 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 SUPERFAMILY Cytochrome P450 39 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0841 508 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0841 Vra-Chr6 8508089 8509945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0841 11 494 Cytochrome P450 AT3G48280 39.754 4.99e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0841 - K23807 gmx:100779851 775.778