Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0836 ATGGATTATAACTTGATCTCATTCTTACCCTTTTTTCTATATTCATTGAGTTTCATCCTTTTTGTTTCACAGTTTCTAAAAGTGAGAAACATATCCAAAACCTCAGTGAAAACATTGAAGCTTCCCCCAGGGCCATGGAAGCTACCTGTCATTGGAAGCTTACACCACTTAGTTGGCTCACTACCACATCATCGGTTGAGAGAACTTGCTAAAAAACATGGTCCTCTCATGCACCTACAACTTGGTGAGTCATCAACCGTTGTGGTTTCTTCTCCAGAAGTAGCCAAAGATGTCATGAAAACCTATGATGCCATCTTTGCTCAAAGACCGCATCAAATTGCCGCAGACATCATGTGTTATGGTTCCACTGACATTGCCACTGCACCATATGGGGGGTATTGGAAGCAGCAAAGAAGAATATGCTCACAAGAGCTTCTAAGCAACACACGTGTGAGGTCATTTCGATCAATAAGAGAAGAAGAAATGCTGAATTTTTTAAGATATATTGAGTCCATCACTGGTTCTAGTGTGAACCTCAGTGAGAAACTGTCACGCATGACAAATACCATCACTGCAAGGGCAGCTTTTGGTGAAAATTGCAAGGATCAAGAAGAGTTCATTTCCCTTGTCAGGAAACTTATAAAAATGGCCGAGCGTTTAATTATTTCTGATTTGTTCCCTTCTCACAAATGGCTTCATCTGGTCAGTGGGGAGAATCTTAAATTGGAGGAGTTGCACAGAAAATATGATGTAATAATTGGAAACATCATTACAGAGGCAGAAAAAAATATTGGTGAAGTAGAGGTTAATACTCTCCTCTCAGTTCTTCTAAATTTGAAACATCAAGGTGCCCTCGAATATCCTTTGACAATCGATAACATCAAGGCTGTAATGTTTAACATGTTTGCTGCTGGAACTAATTCATCACCTTCAGTCATGTCATGGGCAATGTCAGAGATGTTGGAAAACCCAAAAGTAATGAACAAAGCTCAGGAAGAAGTTAGAAGAGTTTTTGGTAGTAAAGGATATATGAATGAAGAATCACTTGAAGAACTAAAATACCTGAAAGCAGTGATAAAAGAAACACTAAGATTGCACCCTCCCAATCCTCTTCTTCTTCCAAGGGAATGTAGAGAAACTTGTGAGGTGAAAGGATATACAATACCCGTTGGGACCAAAGTGATAGTAAATGCATGGGCAATCAACAGAGACCCTGATTATTGGAATGATCCAGATAAGTTTTATCCCGAGAGATTCATGAACAGTGAAGTCGATTTTAAAGGGTCCCATCATCAATTCATACCCTTTGGTGCTGGAAGGAGAATGTGTCCTGGAATGTCTTTTGGGATAAATATAATTGAACTTTGTCTTGCAGAACTACTTTACTATTTTAATTGGGAACTTCCATATGGAAACAAGAAAGACTTGGAAATGACTAAAGCTTTGGGAGCCATCCCAATTAGGAAAACGGATCTGGTCTTGGTTCCCATTTCTTACAATCCTCTTCCTTAA 1512 0.3915 MDYNLISFLPFFLYSLSFILFVSQFLKVRNISKTSVKTLKLPPGPWKLPVIGSLHHLVGSLPHHRLRELAKKHGPLMHLQLGESSTVVVSSPEVAKDVMKTYDAIFAQRPHQIAADIMCYGSTDIATAPYGGYWKQQRRICSQELLSNTRVRSFRSIREEEMLNFLRYIESITGSSVNLSEKLSRMTNTITARAAFGENCKDQEEFISLVRKLIKMAERLIISDLFPSHKWLHLVSGENLKLEELHRKYDVIIGNIITEAEKNIGEVEVNTLLSVLLNLKHQGALEYPLTIDNIKAVMFNMFAAGTNSSPSVMSWAMSEMLENPKVMNKAQEEVRRVFGSKGYMNEESLEELKYLKAVIKETLRLHPPNPLLLPRECRETCEVKGYTIPVGTKVIVNAWAINRDPDYWNDPDKFYPERFMNSEVDFKGSHHQFIPFGAGRRMCPGMSFGINIIELCLAELLYYFNWELPYGNKKDLEMTKALGAIPIRKTDLVLVPISYNPLP* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0836 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 SUPERFAMILY Cytochrome P450 42 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PANTHER CYTOCHROME P450 71B11-RELATED 10 500 - -
Vra6g0836 503 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vra6g0836 503 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 500 - -
Vra6g0836 503 Pfam Cytochrome P450 42 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0836 503 Gene3D Cytochrome P450 35 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0836 Vra-Chr6 8457557 8459390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0836 31 498 Cytochrome P450 AT4G13290 40.541 1.23e-122 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0836 - K23807 gmx:100779851 761.14