Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0823 ATGGAGGATTTATTTCTTTCCATCGCAACAAAGATTGCAGAATATACAGTGCATCCAATTTTACATCATGCTCAATACTTGTGTTGTTTCAACAACTTTGCTTCCAATCTTCCAAATGCCAAAGAGCAATTGGAATTTACTCGAGATGGAGTGAAGGAGCGAATTAGAGCCATCTATAGGATTGAAAAAGTTGAGCCAACTGTAGAGAAATGGTTGAAAGATGTTGAAAAAGTCTTAGAAGAAGTGCAAATGCTGGAAGAAAGAATATTGAGCGTGAACAAAAGCTATTTCAAAAGGCAGTGTCAATATTCTCTTGCAAAACAAATAGAAAGAAAAACATCTGAAATGATTCAGCTCCATAGTAATAGCAAGTTTGAACCGTTTTCGAGGATTACTGAACTTCCAGGCATGAAGTACTATTCTTCCAAAGATTTCTTTATGTTCAACTCTACAGAAGTATCTTACAAGAAGCTTCTAGAAGCACTAAAGAATAAAAGTGCTTTCATAATTGGATTAGTTGGATTAGGAGGGTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAAGCTGAAGACATGAAAATCTTTGAGAAGGTTGTATGGGCAACAGTGTCTCAACCTCTAAATATCAGAACTATCCAAGCTCAGATTGCTGATCAATTGGGCTTCAAGTTAAATGAAGAATCAGAAATTGGTAGAGCACAGAGACTATCAGAAAGATTAAGGAAAGGTACAACTCTTGTAATCTTGGATGATGTATGGGAAAAACTAAACTTTGAAGCATTAGGTATTCCACTTGATGAAAGCAATAAGGATTGTTGCGTATTGATAACTACTCGGAGTAAAGAAGTATGCACTTCTATTCAATGCCAAAGTACAATCGAACTTAATCTTTTGAGTGACGAGGAAGCTTGGACTTTGTTCAGACATTATGCAAACATAACTGATGACTCCTCAGAAGCTTTGAAAGGTGTGGCAAGAAAAATTGTTAATGAATGTAAGGGATTGCCCATTGCAATTGTGACCGTGGGAAGCACGCTAAAGGATAAAACTATTGCAAATTTTGAGCTAGCATTATCAAAACTAGAAATTTCAGAGCCACTAGATATTCCACAAGGCTTTAGAAGTCCGTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCCATTAGCTCAATCCTTATTATTGTTGTGTTCTATGTTTCCAGAGGATTGTGAAATAGATTTGGAAGATTTGTTTCGATTTGGAAGGGGATTTGGCACAATCGGAACGATGTTTGGAACGATGGAGAAAGCAAGGAGAGAGATGGATGCAGCTATTGACATGCTCAAGAATTGTTTTTTGTTAATGCATGCAAAAGAAAAATACAAGGTAAAAATGCATGATCTGGTTCGTGATGTAGCATTGTGGATTGCATCTAAAAGTGGTCAAGCAATTTTCACTCGTACTAAAGTGGATCCAATAGTGTTGGCAGATGATGATGAAGTCATGAAGGATATGAAAGCAATAGCTGTATGGGGTTCGAAAAATGATCATCTTCTCAATTATAAAATAAATTGTCCAATACTTGAAATTCTCTTGCTTTCTTTTAATGAGAGTGGTGGCGTAAAAGTATCAGATGAGTGTCTTCAAAGCTTGGAAAAGCTTAAAACCTTAGCAATCTTAGAGTCAGCTCTGTGGAATAGAGGTGCTTTGCCTTTGCAAGAGTCATTGAAGTCATTGAAAAACCTTCGAACACTATGCTTGAGGGGTTATGGTTTAGGTGACATATCTTTTGTGGAACGACTGCAAGCACTTGAGATTCTTGATTTAAGTTTCTCTTCTTTTGATGATTTGCCTGGTGGGATTGTAAAATTAAAAAAGTTGAAGCTTTTGGATTTGTACCAATGTTGGATTCAGAAAAAAGAAAATGTTAATCCTTACGAAGTTGTGGGGAAATGTTTGCAGCTTGAGGAACTATATTTGCATTTGATCAATTATGAAAAGGCCTTTCCACCTGATGTCTCTTTCTCCAGATTACAAAGGTATGTTATAGAAACTCGTCCTGATCGATCTTCTGATGGTGATACTACTGATCTTATGAAAAAATATGGACATTCTAGAAGTTTAATAATGAATGGGTTTGATGTTGCTCCTCAAAGTTTTATATCATTACCAATAAAGGATCTATTTATAAGAGCAGAGTTCCTTTGTTTGAGGGACCTTAGGGAAGATTATAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCAGTTGATTGCCCTAAGACTCTATTATGGTTCAGTTGAATGTCTCGTTGATAGCACTGAAAAGGATAAAACTGAAGTAATTGCATTCTCCGAGCTTGTTTACTTAAGTTTGGTACGCATATATAGCCTTCGAGAGGTGTTTTGTGATCCCTCTTCGCGATGTTCTCTCAAAAATTTACAAGAGCTCGAGATAAAAAATTGTGGAAATTTATATAGCATATCCTTTCCAAGGAATTCAAAACTATGCAATCTAAAGGTCATTTCAATATCAGAATGCCCAATGCTAACTTCTCTTTTCACGTCATCCGTTGGTCAAACTCTAGAGCTGTTAGAGGATCTAATAATATCTAAATGCAGATCATTGAGACACATAATTGAAGAAGAGAATGATGTTCTTTCAAGCACTCAAAGTCATTCTTCTTTTACGCTCCCAAAATTAAGGAATATTTCTATTTTTGGATGTGACAATTTGGAGTATGTGTTCTCTGTGGTTTTATTCGAAGGGCTTTTAAGTTTGAAAAGTGTGAATATTGGGCGCAACCGAGCGTTGAAGTATGTATTTGGCAGTGAAAAGGAGCATAATGTTGCAGGGTACCCAAGTTTCCAGCAGACTAATACCATAACAAATTTGTTTAATTTGAATACTTTGACATTTAGTGATTTGCCAAATCTAATTGCCATTTGGCCTGAATATTTTCGTGCTCATCTCCCAAGTCTTAATTATTTATGTTGTGATGATTGTCCAAAATTGTCCATACATAAGGCGATGAATGCTTCAGATATCCAGCAACAACAGACAACTCCAACGGAGAATGAAATACTATGGTTGATTACCAACACACTCAATCAATTCGGGGATGATCCATTGTCTCACCCCCAACTCAAAGTTGTCCTCAAATTTAGAGAACTAGAGTTGATTGATATTAGAATAAAAGGTATCTTCCAATTCCAAATGGGAGAAGAAGGGGGCACTACAGAACTGGTTCCCCTAAACTTGGATATAGAGTATCTATGCTTGTTTAATCTACCTGAACTCAACTTCATATGGAAGGGTCCCACAGAAGAGTGCTCTCAGTTACACAAGGCTTTTGCATTTAGTGAAGAAGAGATGGGTAAGGATGGAAAACAAGTACTATTACCGAACTTGAAAGATATAAGACTCATAAATTTGCCAAACTTGGAAGAGATTCACCACGGATTTAAGTTGAAAGAAGATGTTGAACAAACATTAGAGGAATGTCCTAAGTATTCTCCAAGTTCATATCTACATCAAGAGGAGAATGAGGTCACCTTGGAGGATGCCTTGGAGAGGAACGAAAACATTGATGCTGCTCCTTAG 3603 0.365 MEDLFLSIATKIAEYTVHPILHHAQYLCCFNNFASNLPNAKEQLEFTRDGVKERIRAIYRIEKVEPTVEKWLKDVEKVLEEVQMLEERILSVNKSYFKRQCQYSLAKQIERKTSEMIQLHSNSKFEPFSRITELPGMKYYSSKDFFMFNSTEVSYKKLLEALKNKSAFIIGLVGLGGSGKTTLAKEVGKKAEDMKIFEKVVWATVSQPLNIRTIQAQIADQLGFKLNEESEIGRAQRLSERLRKGTTLVILDDVWEKLNFEALGIPLDESNKDCCVLITTRSKEVCTSIQCQSTIELNLLSDEEAWTLFRHYANITDDSSEALKGVARKIVNECKGLPIAIVTVGSTLKDKTIANFELALSKLEISEPLDIPQGFRSPYVCLELSYNNLTNPLAQSLLLLCSMFPEDCEIDLEDLFRFGRGFGTIGTMFGTMEKARREMDAAIDMLKNCFLLMHAKEKYKVKMHDLVRDVALWIASKSGQAIFTRTKVDPIVLADDDEVMKDMKAIAVWGSKNDHLLNYKINCPILEILLLSFNESGGVKVSDECLQSLEKLKTLAILESALWNRGALPLQESLKSLKNLRTLCLRGYGLGDISFVERLQALEILDLSFSSFDDLPGGIVKLKKLKLLDLYQCWIQKKENVNPYEVVGKCLQLEELYLHLINYEKAFPPDVSFSRLQRYVIETRPDRSSDGDTTDLMKKYGHSRSLIMNGFDVAPQSFISLPIKDLFIRAEFLCLRDLREDYKNIIPSMDPQGMNQLIALRLYYGSVECLVDSTEKDKTEVIAFSELVYLSLVRIYSLREVFCDPSSRCSLKNLQELEIKNCGNLYSISFPRNSKLCNLKVISISECPMLTSLFTSSVGQTLELLEDLIISKCRSLRHIIEEENDVLSSTQSHSSFTLPKLRNISIFGCDNLEYVFSVVLFEGLLSLKSVNIGRNRALKYVFGSEKEHNVAGYPSFQQTNTITNLFNLNTLTFSDLPNLIAIWPEYFRAHLPSLNYLCCDDCPKLSIHKAMNASDIQQQQTTPTENEILWLITNTLNQFGDDPLSHPQLKVVLKFRELELIDIRIKGIFQFQMGEEGGTTELVPLNLDIEYLCLFNLPELNFIWKGPTEECSQLHKAFAFSEEEMGKDGKQVLLPNLKDIRLINLPNLEEIHHGFKLKEDVEQTLEECPKYSPSSYLHQEENEVTLEDALERNENIDAAP* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0823 1200 SUPERFAMILY L domain-like 462 1007 - -
Vra6g0823 1200 PRINTS Disease resistance protein signature 169 184 - -
Vra6g0823 1200 PRINTS Disease resistance protein signature 241 255 - -
Vra6g0823 1200 PRINTS Disease resistance protein signature 334 348 - -
Vra6g0823 1200 PRINTS Disease resistance protein signature 809 825 - -
Vra6g0823 1200 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 10 1148 - -
Vra6g0823 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 400 IPR027417 -
Vra6g0823 1200 Coils Coil 68 95 - -
Vra6g0823 1200 Gene3D - 386 472 IPR036388 -
Vra6g0823 1200 Gene3D - 140 296 IPR027417 -
Vra6g0823 1200 Gene3D Ribonuclease Inhibitor 489 679 IPR032675 -
Vra6g0823 1200 PANTHER DISEASE RESISTANCE PROTEIN RP 10 1148 IPR044974 GO:0006952
Vra6g0823 1200 Pfam NB-ARC domain 156 364 IPR002182 GO:0043531
Vra6g0823 1200 Gene3D - 299 385 IPR042197 -
Vra6g0823 1200 Gene3D Ribonuclease Inhibitor 705 887 IPR032675 -
Vra6g0823 1200 Gene3D Ribonuclease Inhibitor 888 1026 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0823 Vra-Chr6 8225014 8233616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0823 155 488 WRKY Transcription Factor Family AT5G45050 24.419 1.38e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0823 - - vra:106763356 1607.81