Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0820 ATGGCGGATGAAACACAAAATGAACTGAAGGAGGAGATTCCAGAAATTGTACCCTTTGACCCTACCAAAAAGAAGAAGAAAAAGAAAGCTACAATTATAGATCCTGCTGATGACCCCGTGGAGAAATTGGCTGAGAAGACGGAAAACCTCACAGTTTCTGATGGGGTTGAGGCTGCATTTACTGGTTTGAAAAAGAAAAAGAAGAAGCCTGTTGAAATGAGTAACTTGAATGATGAGAGCGGAGATGCAGTTGAAGATTTGGATGATCATGCTGAAGACGATGAAGGAGAAATAGTTGCTCCTCAGGCTCGTTATCCTTGGGAAGGGAGTGATCGAGATTATGAATACGAGGAGCTTCTTGGCAGAGTGTTTAACATTCTTCGTGAGAATAATCCTGAACTTGCTGGAGATAGGCGAAGGACAGTAATGAGGCCTCCTCAGGTTCTTCGTGAAGGCACAAAGAAAACTGTGTTTGTGAATTTTATGGATCTGTGCAAAACAATGCATCGGCAGCCTGACCATGTCATGGCTTTCTTGCTGGCTGAGTTGGGTACAAGTGGATCGCTTGACGGACAGCAGAGATTGGTTGTGAAGGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGAAGATATGTCAATGAGTATGTCATTTGCCTTGGATGCAAGAGCCCGGATACTATACTTACGAAGGAGAATCGTCTCTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCGGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAACACGGGAACATGA 807 0.4449 MADETQNELKEEIPEIVPFDPTKKKKKKKATIIDPADDPVEKLAEKTENLTVSDGVEAAFTGLKKKKKKPVEMSNLNDESGDAVEDLDDHAEDDEGEIVAPQARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0820 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Vra6g0820 268 MobiDBLite consensus disorder prediction 1 31 - -
Vra6g0820 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Vra6g0820 268 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Vra6g0820 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Vra6g0820 268 Gene3D - 111 253 - -
Vra6g0820 268 MobiDBLite consensus disorder prediction 1 22 - -
Vra6g0820 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
Vra6g0820 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0820 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 77.323 8.57e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0820 K03238 - gmx:100783618 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0820 6 8132563 8137017 Vra6g0820 6 8132563 8137017 ECH