Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0812 ATGGAGGATTTTTTTCTTTCCATCGCAACAAAGATTGCAGAATATGCAGTGCATCCAATTTTACATCATGCTCAATACTTGTGTTGTTTCAACAAATTTGCTTCCAATCTTCCAAATGCCAAAGAACAATTGGAATTGACTCGAGATGAAGTGAAGGAGCGAATTAGAGAAGCCATAAATAGAGTTGAAAAAGTTGAGCCAACTGTTGAGAAGTGGCTGAAAGATGTTGAAAAAGTCTTAGAAGAAGTGCAAATGCTCGAAGAAAGAATATTGAGCTTGAACAAATACTATTTTAGAAGGCAATGTCAATATTCCCTTGCAAAACAAATAGAAAGAAAAACATCTGAAATGATTCAGCTCCATCGTAATAACAAGTTTGAACCGTTTTCGAAGATTACTGAACTCCCAGGCATGCAGTACTATTCTTCCAAAGATTTCTTTATGTTCAACTCTACAGAAGCATCTTACAAGAAGCTTCTAGAAGCATTAAATAATAAAAGTGCTTTTATAATTGGATTAGTTGGATTAGGAGGGTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAAGCTGAAGACATGAAACTCTTTGAGAAGGTTGTCTGGGCAACAGTGTCTCAACCTCTAAATATAAGAAGTATTCAAGATCAAATTGTTGATCAATTGGGCTTCAAGTTAACGGAAGATTCAGATATAGGTAGAGCTCGTAGGCTATCAGAGAGATTGAAAAAAGGTACAACTCTTATAATCATGGATGACATATGGGAAATTCTAAACTTTGAAACTTTGGGTATTCCGCTTAATGAAAGCAGTAAGGCTTGTTGCATATTGATAACTACACGAAGTAAAGAAGTATGCACTTCTATGCAATGCCAAAGTATAATTGAACTTAATCTTTTGAGTGACGAGGAAGCTTGGACTTTGTTCAGACATTATACAAACATAACTGATGACTCCTCAGAAGCTTTGAAAGGTGTGGCAAGAAAAATTGTTAATGAGTGTAAGGGATTGCCCATTGCAATTGTGACAGTGGGAAGCACGCTAAAGGATAAAACTATTGCAAATTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCTAAGCCACTAGATATTCCAAAAGGCTTAACAAGTCCTTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCCATTAGCTCAATCCTTATTATTGTCATGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTGTTTCGATTTGGAATGAGATTTGACATAATTGGGACGTTTGGAACGATGGAGAACGCAAGGAGAGAGATGGATGCAGCTATTGACATGCTCAAGAATTGTTTTTTGTTAATGCATGCAAAAGAAAAACAAAGGGTAAAAATGCACGATTTGGTTCGTGATGTAGCGTTGTGGATTGCGTCTAAAAGCGGTAAAGCAATTTTCACAGGTACTGAAGTGGACCCAAGAGCTTTGGCAGATGATGAATCCCTGAAAGATAAGAAAGCAATAGCCGTATGGGGTTTGAAAAGTTATGATGTTCTCAATTATAAAATAAACCGTCCAATACTTGAAACTCTCTTGCTTTCTTTTAATGTGAGTGGTGGCGTAAAAGTATCAGATGGGTGTCTTCAAAGCTTGGAAAACCTTAAAACCTTAGCAATCTTAAAATCTCGGTGGAAGAGCGATGCATTGTCTTTGCAAGAGTCATTGAAGTCATTAAAAAACCTTCGAACACTATGCTTGAGGGGTTTTGATTTAGGTGACATATCTTTTGTGGAAATCTTACAAGCACTTGAGATTCTTGACTTACGTGACTCTTATTTTGATGATTTGCCTATTGGGATTGTAGAATTAAAGAAGTTGAGGCTTTTGGATTTGTACGAATGTTGGATGACGAAAAATGAAAATGTTGAAGTTTACAAAGTTGTGGGAAAATGTTTGCAGCTTGAGGAATTGTATTTTCGTTTGAGTTATAATTATAAAAAGGACTTTCCATATGATGTCTCTTTCTCCAGATTACAAAGATATGTTATAGAAATTGGTGATAATCGACGTACTCTTGATGATATTACTAAGCTTATGAAAAAATATGGACAACCTAGAAGTTTAATAATGAATGGGTTTGATGTTGCTCCTCAAAGTTTTATATCATTACCAATCAAGGATCTATTTATAAGAGCAGAGTTCCTTTGTTTGAGGTACCAGAGAAATTATAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCAATTGATTGCCCTGAGACTCTATCATGCTTCAGGTATAGAATGTCTCGTTGATAACACTGAAAAGGATAAAACTGAAGTAATTGCATTCTCCGGGCTTGTTTACTTAAGTTTGGTATACAATTATAGCCTTCGAGAGGTGTTTCGTGATCCCTCTTCGCGATGTTCTCTCAAAAATTTACAAGAGCTCGAGATAAAAAATTGTGGAAGTTTATATAGCATATCCTTTCCAAGGAATTCAAAACTATGCAATCTAAAGGTCATTTCAATATCAGATTGCTACATGCTAATTTCTCTTTTCACGTCATCCGTTGTTCAAACTCTAGAGCTGTTAGAGGATCTAAGAATATCTAAATGCAGATCATTGAGACACATAATTGAAGAAGAGAATGATGTTCTTTCAAGCACTCAAAGTCATTCTTCTTTGACGCTCCCAAAATTAAGATTTCTTTTCATTGAATATTGTGACAATTTGGAGTATGTGTTCTCTGTGTTTTTAGTCCAAGGGCTTTTAAGTTTGGAAAGTGTGGATATTATGCGCAACCGAGCGTTGAAGTATGTATTTGGCAATGAAAAGGAGCATAATGTTGCAGGGTACCCAAGTTTCCAGCAGACTAATACCATAACAAATTTGTTTAATTTGAATACTTTGACATTTAGTGATTTGCCAAATCTAATTGCCATTTGGCCTGAATATTTTCGTGCTCATCTCCCAAGTCTTAATGATTTATCTTGTCGTTATTGTCCAAAATTGTCCATACATAAGGCGATGAATGCTTCAGATATCCAGCAACAGACAACTCCAACGGAGAATGGAATACTATGGTTGATTACCAACACACTCAACCGATTGGAGGATGATCCATTGTCTCACCCCCAACTCAAAGCTGTCCTCAAAATTATAAGACTTCATTTGAAGGATGTTAGAATGAAAGGTATCTTCCAATTCCAAATGGGAGAAGAAGGGGGCACTACAGAACTGCTTCCCCTAAACTTGGATATTAATTATCTAATATTGGAGAATCTACCTGAGCTCAACTTCATATGGAAAGGTCCCACAAGTTTTCTAAGCCTCCAAAACCTTCACCTAATTTATGTGGATGGATGTCCAAAATTGAAAACCATCTTCTCCACCACAGTTGTTACAAGTTTACCAATGCTGAAATATCTGAATATAAGAAACTGTGATGAATTGGAACAAATATTTGATTTAGGTGATGCATATCAACTCAATAGCCCATATTCTTCCCAACAAGTCTGCTTCCCAACTCTCTCAAGTATTACAGTTCAAAAGTGCAATAAGTTGAAATGTCTATTTTATAATCTCTCGGCTTGTCATTTTACTAGTCTGAGAAGATTGAAAATACAAGAGTGCTCTCAGTTACACAAGGCTTTTGCATTTAGTGAAGAAGAAGAGATGGGTAAGGATGGAGAACAAGTACTGTTACAGAAATTGAAAAATATAAGACTCATAAATTTGCCAAACTTGGAAGAGATTCACCAGGGATTTAAGTTGAAAGAAGATGTTGAACAAACATTAGAGGAATGTCCTAAGTATTCTCCAAGTTTATATCTACATCAAGATATGTAA 3849 0.3559 MEDFFLSIATKIAEYAVHPILHHAQYLCCFNKFASNLPNAKEQLELTRDEVKERIREAINRVEKVEPTVEKWLKDVEKVLEEVQMLEERILSLNKYYFRRQCQYSLAKQIERKTSEMIQLHRNNKFEPFSKITELPGMQYYSSKDFFMFNSTEASYKKLLEALNNKSAFIIGLVGLGGSGKTTLAKEVGKKAEDMKLFEKVVWATVSQPLNIRSIQDQIVDQLGFKLTEDSDIGRARRLSERLKKGTTLIIMDDIWEILNFETLGIPLNESSKACCILITTRSKEVCTSMQCQSIIELNLLSDEEAWTLFRHYTNITDDSSEALKGVARKIVNECKGLPIAIVTVGSTLKDKTIANFELALSRLENSKPLDIPKGLTSPYVCLELSYNNLTNPLAQSLLLSCSMFPEDYEIDLEDLFRFGMRFDIIGTFGTMENARREMDAAIDMLKNCFLLMHAKEKQRVKMHDLVRDVALWIASKSGKAIFTGTEVDPRALADDESLKDKKAIAVWGLKSYDVLNYKINRPILETLLLSFNVSGGVKVSDGCLQSLENLKTLAILKSRWKSDALSLQESLKSLKNLRTLCLRGFDLGDISFVEILQALEILDLRDSYFDDLPIGIVELKKLRLLDLYECWMTKNENVEVYKVVGKCLQLEELYFRLSYNYKKDFPYDVSFSRLQRYVIEIGDNRRTLDDITKLMKKYGQPRSLIMNGFDVAPQSFISLPIKDLFIRAEFLCLRYQRNYKNIIPSMDPQGMNQLIALRLYHASGIECLVDNTEKDKTEVIAFSGLVYLSLVYNYSLREVFRDPSSRCSLKNLQELEIKNCGSLYSISFPRNSKLCNLKVISISDCYMLISLFTSSVVQTLELLEDLRISKCRSLRHIIEEENDVLSSTQSHSSLTLPKLRFLFIEYCDNLEYVFSVFLVQGLLSLESVDIMRNRALKYVFGNEKEHNVAGYPSFQQTNTITNLFNLNTLTFSDLPNLIAIWPEYFRAHLPSLNDLSCRYCPKLSIHKAMNASDIQQQTTPTENGILWLITNTLNRLEDDPLSHPQLKAVLKIIRLHLKDVRMKGIFQFQMGEEGGTTELLPLNLDINYLILENLPELNFIWKGPTSFLSLQNLHLIYVDGCPKLKTIFSTTVVTSLPMLKYLNIRNCDELEQIFDLGDAYQLNSPYSSQQVCFPTLSSITVQKCNKLKCLFYNLSACHFTSLRRLKIQECSQLHKAFAFSEEEEMGKDGEQVLLQKLKNIRLINLPNLEEIHQGFKLKEDVEQTLEECPKYSPSLYLHQDM* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0812 1282 PANTHER - 24 1005 - -
Vra6g0812 1282 PANTHER - 1063 1271 - -
Vra6g0812 1282 Coils Coil 41 61 - -
Vra6g0812 1282 Gene3D Ribonuclease Inhibitor 889 1021 IPR032675 -
Vra6g0812 1282 Gene3D Ribonuclease Inhibitor 521 888 IPR032675 -
Vra6g0812 1282 Gene3D Ribonuclease Inhibitor 1034 1224 IPR032675 -
Vra6g0812 1282 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1063 1271 - -
Vra6g0812 1282 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 24 1005 - -
Vra6g0812 1282 PRINTS Disease resistance protein signature 170 185 - -
Vra6g0812 1282 PRINTS Disease resistance protein signature 242 256 - -
Vra6g0812 1282 PRINTS Disease resistance protein signature 335 349 - -
Vra6g0812 1282 PRINTS Disease resistance protein signature 808 824 - -
Vra6g0812 1282 Gene3D - 139 297 IPR027417 -
Vra6g0812 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Vra6g0812 1282 Gene3D - 386 472 IPR036388 -
Vra6g0812 1282 SUPERFAMILY RNI-like 1077 1220 - -
Vra6g0812 1282 Pfam NB-ARC domain 155 388 IPR002182 GO:0043531
Vra6g0812 1282 Gene3D - 300 385 IPR042197 -
Vra6g0812 1282 SMART AAA_5 167 311 IPR003593 -
Vra6g0812 1282 Coils Coil 69 96 - -
Vra6g0812 1282 SUPERFAMILY L domain-like 462 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0812 Vra-Chr6 8026681 8031805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0812 156 480 WRKY Transcription Factor Family AT5G45050 23.054 4.19e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0812 - - vra:106778921 1813.51