Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0810 ATGGAGGATTTATTTCTTTCCATCGCAACAAAGATTGCAGAATATACAGTGCATCCAATTTTACATCATGCTCAATACTTGTGTTGTTTCAACAACTTTGCTTCCAATCTTCCAAATGCCAAAGAACAATTGGAATTTACTCGAGATGGAGTGAAGGAACGAATTAGAGAAGCTAGGAATAGGGTTGAAAAAGTTGAGCCAACTGTTGAGAAGTGGCTGAAAGATGTTGAAAAAGTCTTAGAAGAAGTGCAAATGCTAGAAGAAAGAATATTGAGTGTGAACAAAAGCTATTTCAGAAGGCAATGTCAATATTCTCTTGCAAAACAAATAGAAAAAAAAACAACTAAAATGATTCAACTCCATCGTAATAGCAAGTTTGAACCCTTTTCGAGGATTACTGAACTCCCAGGCATGCAGTACTATTCTTCCAAAGATTTCTTTATGTTCAACTCTANAGNAGCATCTTACAANAAGCTTCTAGAAGCATTAAATAACAAAAGTGCTTTCATAATTGGATTAGTTGGATTAGGAGGGTCAGGGAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAAGCTAAAGAGATGAAACTCTTTGAGAAGGTTGTCTGGGCAACAGTGTCTCAATCTCTAAATATAAGAAGTATCCAAGATCAGATTGCTGACCAATTGAGCATTGATTTAAAGGAAGCATCCGAAATAGGTAGAGCACAAAGACTATCAGAAAGATTAAGGAAAGGTACAACACTTTTAGTCTTGGATGACATATGGGAAATTCTAAACTTTGAANCTTTNGGNATTCCGCTTNATGAAAGNAGTAAGGCTTGTTGCATATTGATAACTACACGAAGTAAAGAAGTATGCACTTCTATGCAATGCCAAAGTATAATTGAACTTAATCTTTTGAGTGACGAGGAAGCTTGGACTTTGTTCAGACATTATGCAAACATAAATGATGACTCCTCAGAAGCTTTGAAAGGTGTGGCNAGAAAAATTGTTAATGANTGTAAGGGATTGCCCATTGCAATTGTGACNGTGGGAAGCACGCTAAAGGATAAAACTATTGCAAATTTTGAGTTAGCATTGTCAAGGCTAGAAAATTCTAAGCCACTAGATATTCCAAAAGGCTTAACAAGTCCTTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCCATTAGCTCAATCCTTATTATTGTCATGTTCTATGTTTCCAGAGGATTATGAAATAGATTTGGAAGATTTGTTTCGATTTGGAATGAGATTTGACATAATTGGGACGTTTGGAACGATGGAGAACGCAAGGAGAGAGATGGATGCAGCTATTGACATGCTCAAGAATTGTTTTTTGTTAATGCATGCAAAAGAAAAACAAAGGGTAAAAATGCATGATTTGGTTCGTGATGTAGCGCTGTGGATTGCGTCTAAAAGTGGTAAAGCAATTTTCACAGGTACTGAAGTGGACCCAAGAGCTTTGGCAGATGATGAAACCCTTAAAGATAGGAAAGCAATAGCCGTATGGGGTTTGAAAAGTTATGATGTTCTCAATTATAAAATAAACCGTCCAATACTTGAAACTCTCTTGATTTCTTTTAATGTGAGGGATAGCGTAAAAGTATCAACTGGGTGTATTCAAAGCTTGGAAAACCTTAAAACCTTAGCAATCTTAAACTCAGCTTGGTGGAAGATCAATGCATTACCTTTGCAAGAGTCATTGAAGTCATTAAAAAACCTTCGAACACTATGCTTGAGGGGTTTTGGTTTAGGTGACATATCTTTTGTGGAAGGCTTGCAAGCACTTGAGATTCTTGACTTACGTGGCTCTTATTTTGATGATTTCCCTATTTGGATTCTAGAATTAAAGAAGTTGAGGCTTTTGGATTTGTACGAATGTCATATTATGAAATATAAAAATAGTCAATTTTACGAAGTTGTAGGAAAATGTTTGCAGCTTGAGGAATTGTATTTGTGTTTGAGTTATGGTATAAAACCCTCCCCATATGATGTCTCTTTCTCCAGACTTCAAAGGTATGTCATAGAAACTGGTCATAATCGACGTTCTTTTGATGATACTACTGAGCTTATGAAAAAATACGGACAACCTAGAAGTTTAATAATGAATTGGTGGTTTGAAGTTGTTCCTGAAAGTTTTATATCATTACCAATCAAGGATCTATTCATAAGAGCAGAGTTCCTTTGTTTGAGGTTCCTGAGAAATTATAAAAATATAATCCCATCCATGGATCCACAAGGCATGAATCAGTTGATTGCCCTGAGACTCTATGATTGTTCAAATATAGAATGTCTCGTTGATAGCACTATCAGTTTTGGCTTGCTTCAAACTGAAGTAATTGCATTCTCCGCTCTTGTTTACTTAAGTTTGGTAAACTTACATGACCTTCGAGAGGTGTTTTGTGATCCATCTTCGCGATGTTCTCTCAAAAATTTACAAGAGCTCGAGATAAAAAATTGTGGAAAATTATATAGCATATCCTTTCCAAGGAATTCAAAACTATGCAATCTAAAGGTCATTTCAATATCAGAATGCCCAATGCTAACTTCTCTTTTCACGTCATCCGTTGGTCAAACTCTAGAGCTGTTAGAGGATCTAAAAGTATATTATTGTAGATCATTGAGACACATAATTGAAGAAGAGAATGATGTTCTTTCAAGCACTCAAAGTCATTCTTCTTTTACGCTCCCAAAATTAAGGAATATTGCTATTTTTGGATGTGACAATTTGGAGTATGTGTTCTCTGTGTTTTTAGTCGAAGGGCTTTTAAGTTTGAAAAGTGTGAATATTGTGGGCAACCAAAAGTTGAAGTATGTATTTGGCAGTGAAAAGGAGCATAATGTTGCAGGGTACTCAAATTTCCAGCAAACTAATACGCGAAGAAATTTGTTTAATTTGAATACTCTGGAGTTGAGGTTTTTACCAAATCTAATTGCCATTTGGCCTGAATATTTTCGTGCTCATCTCCCAAGTCTTAATTATTTATATTGTGATGATTGTCCAAAATTGTCCATACATAAGGCGATGAATGCTTCAGATATCCAGCAACAACAGACAACTCCAACGGTAATATATTAA 3093 0.3531 MEDLFLSIATKIAEYTVHPILHHAQYLCCFNNFASNLPNAKEQLEFTRDGVKERIREARNRVEKVEPTVEKWLKDVEKVLEEVQMLEERILSVNKSYFRRQCQYSLAKQIEKKTTKMIQLHRNSKFEPFSRITELPGMQYYSSKDFFMFNSXXASYXKLLEALNNKSAFIIGLVGLGGSGKTTLAKEVGKKAKEMKLFEKVVWATVSQSLNIRSIQDQIADQLSIDLKEASEIGRAQRLSERLRKGTTLLVLDDIWEILNFEXXGIPLXEXSKACCILITTRSKEVCTSMQCQSIIELNLLSDEEAWTLFRHYANINDDSSEALKGVARKIVNXCKGLPIAIVTVGSTLKDKTIANFELALSRLENSKPLDIPKGLTSPYVCLELSYNNLTNPLAQSLLLSCSMFPEDYEIDLEDLFRFGMRFDIIGTFGTMENARREMDAAIDMLKNCFLLMHAKEKQRVKMHDLVRDVALWIASKSGKAIFTGTEVDPRALADDETLKDRKAIAVWGLKSYDVLNYKINRPILETLLISFNVRDSVKVSTGCIQSLENLKTLAILNSAWWKINALPLQESLKSLKNLRTLCLRGFGLGDISFVEGLQALEILDLRGSYFDDFPIWILELKKLRLLDLYECHIMKYKNSQFYEVVGKCLQLEELYLCLSYGIKPSPYDVSFSRLQRYVIETGHNRRSFDDTTELMKKYGQPRSLIMNWWFEVVPESFISLPIKDLFIRAEFLCLRFLRNYKNIIPSMDPQGMNQLIALRLYDCSNIECLVDSTISFGLLQTEVIAFSALVYLSLVNLHDLREVFCDPSSRCSLKNLQELEIKNCGKLYSISFPRNSKLCNLKVISISECPMLTSLFTSSVGQTLELLEDLKVYYCRSLRHIIEEENDVLSSTQSHSSFTLPKLRNIAIFGCDNLEYVFSVFLVEGLLSLKSVNIVGNQKLKYVFGSEKEHNVAGYSNFQQTNTRRNLFNLNTLELRFLPNLIAIWPEYFRAHLPSLNYLYCDDCPKLSIHKAMNASDIQQQQTTPTVIY* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0810 1030 Gene3D - 300 385 IPR042197 -
Vra6g0810 1030 PRINTS Disease resistance protein signature 170 185 - -
Vra6g0810 1030 PRINTS Disease resistance protein signature 242 256 - -
Vra6g0810 1030 PRINTS Disease resistance protein signature 335 349 - -
Vra6g0810 1030 PRINTS Disease resistance protein signature 619 635 - -
Vra6g0810 1030 Coils Coil 41 61 - -
Vra6g0810 1030 SMART AAA_5 167 311 IPR003593 -
Vra6g0810 1030 Pfam NB-ARC domain 158 388 IPR002182 GO:0043531
Vra6g0810 1030 Gene3D Ribonuclease Inhibitor 502 667 IPR032675 -
Vra6g0810 1030 SUPERFAMILY L domain-like 462 1006 - -
Vra6g0810 1030 Gene3D - 139 297 IPR027417 -
Vra6g0810 1030 Gene3D Ribonuclease Inhibitor 772 1025 IPR032675 -
Vra6g0810 1030 PANTHER - 24 1009 - -
Vra6g0810 1030 Gene3D - 386 472 IPR036388 -
Vra6g0810 1030 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 24 1009 - -
Vra6g0810 1030 Coils Coil 69 96 - -
Vra6g0810 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 399 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0810 Vra-Chr6 7964780 7967872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0810 156 480 WRKY Transcription Factor Family AT5G45050 25.075 4.30e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0810 - - vra:106763356 1999.56