Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0808 ATGGAGTATATCTTGGGAATTTTATGTCACTACGCAGGAAAGATTGCAGAATATACGTTGGGTTCAGTATGCGTCTGTTATATCAACGACTTTACTTTGAATGTTCTAGATGTTAAAAAAAGTTTCGAATGGATTCGAGGGATTATGAAAGAGCAAATCAGAGAAATCACTAATGGGACTGAAAAATTTGAGCCAGATTTTCTGAAACACGTTGAGAATTTATTGAAAGCTGCTGAAAACGTCTCAGAACGACAGCAACTACTGGAAGAAAGAATTTCAAATACAAACAAGAGCTATTTCAGAAGGCAACGTCTATATTTTCTTGCAAAAGAAATAGAAAGAGAAACACACAAAATACAAGAGCTCCTCCTAGATGTTAAGAAGATTGAATCACTCTCCAGGATTACTGAACTTTCTAATGATTTGGTTGCGTTCAAATCTCCTGAAGAAGCTTACACCGAGATTTTGGCAGCATTAAAGGATAGAAGTGTTTCTATTATTGGACTTGTTGGATTTGGAGGCTCAGGAAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAAGCGGAAGAGATTAAACTTTTTGAGAAGGTTGTCTGGGCAACAGTGTCTCAACTTCTAAATATAAGAAGTATCCAAGATCAGATTGCTGATCAATTGAATGTTAAGTTAAAGGAAGAGGAAGCATCGGAAATAGGTAGAGCAGATAGAATATCAGAAGGATTAAGGAAACGTACAACTCTTGTAATCTTGGATGATGTATGGGAAAAAGTAAACTTCGAAGCTTTAGGTATTCCACTTGATGAAAGCAGTAAGGGTTGTTGCGTATTGATAACTACTCGGAGTAAAGAAGTATGCACTTCTATGAAATGTCAAAATATAATTGAAGTTAATCCCTTGCATTACAGGAAAGTTAGGGCTTTGTTCAAATTCCATGCAAACATAAGTAATGACTCCCCAGAAGCTTTGAAAGTTTTGGCAGAAAGAATCGTTACTAAATGTAACGGATCGTCTACTGCAATTGCGACGTTAGGAAGCACGCTAAAAGATAAAACTATTGAAGAGTTTGAGTCAGCATGGTTAAGACTACAAAATTCCGAACAACTTAGTTCTCTAAAAGGCTTAACAAGTTATCAACTTTGTCTTAAAGTAAGTTATGATAATTTGACAAACCAATTAGCCAAATCCTTATTATTATTGTGTTCAATATTTCCAAAGAATCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTGGGCGTAATTTGGAGATTTGGAAGAATGGAGAAAGAAAGGAGGGTGATGCATGCAGCTATTAACATCCTTAAGAATTCTTATATGTTGGCATATGTCAAAGAAAAAGAAAAGGTGAAAATGCCTGACTGGATTCGTGATGTAGCCTTGTGGATTGCAGCTGAAAGTGGTCAAGCAATTTTGACATGTACTGCAGTGGATCCAAGGGTGTTGATAGATGATGAAATCACGAAAGATAAGAATGTAATAGCCTTGTGGGATATGAAAAATGGTGAACTTCTCAACTATGAATGGAATTGTCCATCACTTGAAATTCTCTTGCTTCATTCTCCAGAGGTTGGCTTTACAATATCAAATGCTTTAATTGAAAGGTTGAAAATGCTTAAACTACTGGCATTCTTAAAATTTGAATACGGGTGGAAGTTGCCTTTTGAGACAGAAACACCATCATGGTACACTTCACCACTATCGCAATCAATTGAGTCATTAAAAAATCTCAATACTCTTAGCTTGAGAGGTTATAAATTAGGTGACATCTCAGTTTTGGAAAGTCTAGAAGCACTTGAGATTCTTGACTTGCGTGGTTCTTCTTTCAAACAATTGCCTAATGGAATAGTAGCATTACAGAAATTGAAACTCCTAGATTTGTACGGTTGTTTGATTGAGAAAAATAATGCTTATGAAGTTATAGGAAGATGTTTGCGGCTAGAGGAATTGTATTTGTATTTGCTTCCATCAAAAGAGGAGTTTCCACATGATTCTCTTTCTCGAGATTGCAGAGTGTACCTTCATTTGAAGTACATTGAGGGAGGTTACAAAAATGTAATCCCATCCATGCGTTCACAAGGCATGAATCAGATTGTTGTCCTAATCCTTGAACACTGTCTTGATATTGAATTCCTCTTTGATGGCACTTTTACAAACAGCAATGTTGATATGCTTCATACCAAAACTGTGTTTTCCAACCTAGGTACCGTAAGGTTGCATCAGATGCATGGCCTTCGAGAAGTGTTTCATGACCCTTCTTCGCAATGCTCTTTAGAAAGATTACAAGAGCTAAGCATTGATAGTTGTAACCAATTATACAACACATCCTTCCCAAGGAACTCAAATCTATGCAGTCTAAAGGTCTTGAAATTGGAATTTGCCCAATGCTAA 2418 0.3619 MEYILGILCHYAGKIAEYTLGSVCVCYINDFTLNVLDVKKSFEWIRGIMKEQIREITNGTEKFEPDFLKHVENLLKAAENVSERQQLLEERISNTNKSYFRRQRLYFLAKEIERETHKIQELLLDVKKIESLSRITELSNDLVAFKSPEEAYTEILAALKDRSVSIIGLVGFGGSGKTTLAKEVGKKAEEIKLFEKVVWATVSQLLNIRSIQDQIADQLNVKLKEEEASEIGRADRISEGLRKRTTLVILDDVWEKVNFEALGIPLDESSKGCCVLITTRSKEVCTSMKCQNIIEVNPLHYRKVRALFKFHANISNDSPEALKVLAERIVTKCNGSSTAIATLGSTLKDKTIEEFESAWLRLQNSEQLSSLKGLTSYQLCLKVSYDNLTNQLAKSLLLLCSIFPKNHEIDLEDLFRFGRGLGVIWRFGRMEKERRVMHAAINILKNSYMLAYVKEKEKVKMPDWIRDVALWIAAESGQAILTCTAVDPRVLIDDEITKDKNVIALWDMKNGELLNYEWNCPSLEILLLHSPEVGFTISNALIERLKMLKLLAFLKFEYGWKLPFETETPSWYTSPLSQSIESLKNLNTLSLRGYKLGDISVLESLEALEILDLRGSSFKQLPNGIVALQKLKLLDLYGCLIEKNNAYEVIGRCLRLEELYLYLLPSKEEFPHDSLSRDCRVYLHLKYIEGGYKNVIPSMRSQGMNQIVVLILEHCLDIEFLFDGTFTNSNVDMLHTKTVFSNLGTVRLHQMHGLREVFHDPSSQCSLERLQELSIDSCNQLYNTSFPRNSNLCSLKVLKLEFAQC* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0808 805 Gene3D Ribonuclease Inhibitor 486 805 IPR032675 -
Vra6g0808 805 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 55 662 - -
Vra6g0808 805 Coils Coil 112 132 - -
Vra6g0808 805 Gene3D - 127 297 IPR027417 -
Vra6g0808 805 Gene3D - 299 389 IPR042197 -
Vra6g0808 805 Pfam NB-ARC domain 158 387 IPR002182 GO:0043531
Vra6g0808 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 399 IPR027417 -
Vra6g0808 805 PANTHER DISEASE RESISTANCE PROTEIN RP 55 662 IPR044974 GO:0006952
Vra6g0808 805 SUPERFAMILY RNI-like 516 801 - -
Vra6g0808 805 Coils Coil 71 98 - -
Vra6g0808 805 PRINTS Disease resistance protein signature 166 181 - -
Vra6g0808 805 PRINTS Disease resistance protein signature 240 254 - -
Vra6g0808 805 PRINTS Disease resistance protein signature 333 347 - -
Vra6g0808 805 PRINTS Disease resistance protein signature 603 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0808 Vra-Chr6 7931154 7933732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0808 164 472 WRKY Transcription Factor Family AT5G45050 23.028 4.50e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0808 - - gmx:102662074 793.882