Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0769 ATGTCGAAGGGTGACAAGGTTGAGGTTTTGGACTTTTGGGCTAGCCCATTTTGTGGTAGAGTGAAAATTGCTTTGGAAGAGAAAGGGGTGAAGCATGTAGCCAGTGAAGAGGATGTGTTTGGAGCAAAGAGTGAACTTCTCCTGAAGTCAAATCCCATTCATCAAAGAGTTCCTGTGCTTTTGCACAATGGCAAACCCCTTCCTGAGTCTGCTATCATAGTTAGCTACATTGATGAAGTCTGGCCTTCCAAATCCCTGCTTCCATCTGATGCTTATGATCGTGCCCAAGCCAGATTCTGGGTTGATTACATCGATAAAAAGGTGTTTGAAACTGGGAGGAGCATCTGGGCAAGCAATGGAGAAGAGAGAAAAGTGGGGACTAGGGACTTCATTGAAGTTTTGAAGCATCTTGAGGAAGCTCTTGGGGAGAAGGAGTATTTTGGTGGTGATTCCTTTGGGTATTTGGACATCATAGCCATTCCTCATTCAGCTTGGTTTTTGGCCTATGAGGAGCTTGGGGGCTTCAAAGTTGCAGACCATTCACCAAAGATCTCAGCTTGGGTTAAGAGGTGTTTGCAAAGGGAATCTGTTGCCAAAGTTCTGCCAGACCCACACAAGATCTACCAGTTTGTTCTTCACTTCAGGAAGATGTCAGGGCTTGATTGA 666 0.4535 MSKGDKVEVLDFWASPFCGRVKIALEEKGVKHVASEEDVFGAKSELLLKSNPIHQRVPVLLHNGKPLPESAIIVSYIDEVWPSKSLLPSDAYDRAQARFWVDYIDKKVFETGRSIWASNGEERKVGTRDFIEVLKHLEEALGEKEYFGGDSFGYLDIIAIPHSAWFLAYEELGGFKVADHSPKISAWVKRCLQRESVAKVLPDPHKIYQFVLHFRKMSGLD* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0769 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 7 214 - -
Vra6g0769 221 Pfam Glutathione S-transferase, C-terminal domain 130 190 - -
Vra6g0769 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 214 IPR045073 -
Vra6g0769 221 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Vra6g0769 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Vra6g0769 221 CDD GST_N_Tau 7 81 - -
Vra6g0769 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Vra6g0769 221 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Vra6g0769 221 Gene3D - 90 221 - -
Vra6g0769 221 SFLD Glutathione Transferase (cytosolic) 4 218 IPR040079 -
Vra6g0769 221 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Vra6g0769 221 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Vra6g0769 221 Gene3D Glutaredoxin 1 89 - -
Vra6g0769 221 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0769 Vra-Chr6 7491765 7493126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0769 4 216 Glutathione S-transferase Gene Family AT1G78380 56.542 9.27e-84 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0769 K00799 - gmx:100788517 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0769 6 7491765 7493126 Vra6g0769 6 7491765 7493126 ECH