Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0761 ATGACGCCTAAAACTTTCAATTTTCCCGCCAAACGCACAACCGCACTTTTCCTTCTAACCGCAACCGCCGCCGCCGCCGCCGCCGCACAAACTACTAACTCCGCCGTGCTCTCTCATCTTCCATCACTCTCAGCCGACAAAGCTGGAGGCGAAATCCATGGTCTCCTCCGCACCGCTCGTGCCGTCTCCACGGTCGCTTCCACTGTTGTTGACTATGAATTCTCTTTGCGTGGCCTTAAAAAGGACTCCGACCAGTACCGTCTAACGATTTCTCAGGTGCATCTACGCTCCGCCAAGAGGTTTCTCAAGTTATGCGAAGCCAACAAAGGGTTTTATGTGAAGGCTGGGCAGTTTGTTGCGGCGCAGAAAGTGCTTCCTACAGAGTACTCGTCCACTTTGTCTTCGTTACAGGACCGGGTTGCTCCTGTTCCTTTTAAAATAGTCAGGGAGGTGTTAAAGAATAGTCTCGGACCTAATTTCTCTGATATGTTTTTGTCAATTGATGAACAACCTGTAGCTGCTGCATCTATTGCTCAAGTTCACCGTGCAGTGCTGAAAAGCGGTTATGATGTAGCAATCAAGTTATACCCTCAATACAAGCTCGAGTGGCTACCCTTAGCGTTTGCTAAGTCTATGTCTTCAGAACTTGATTTTGTTCAGGAGGCAAGGAATTCTGAGATAGCAGCCAAAACATTCAGAAATAACAAAATGGTCAAGATTCCTCATGTATTCTGGGACTTGACAACAAGGCTTGTCCTAACCATGCAGTTTTGTGCAGGACACAAGATTGATGACTTGGATTTTCTGAATCAGATTGGGGTTGATCCAGAAAAGGTAGCAAAATCACTGATTCAGCTATTTGCTGAAATGATATTTGTACATGGTTACATACATGGTGATCCTCACCCTGGTAATATTTTAGTTTCCCCAGAAGGCTGTAATGGTTTCTCTTTGGTTCTTCTAGATCACGCAGTGTACACGATATTGGATGAAGAATTTAGAAAAGATTTCTGTATGTTATGGGAAGCCTTGATTCTCAAGGATTCAATGAAAACATTGTGGTTTGGTGAGCGATTAGGTTCTGGGAAGTATTCCAGATACTTACCCATCATTTTCACTGGAACAACCATTGAAAGCAAATATGCCGTTGGAATATCGATTGAAGAAAAAGAGGCCTTGAAACGTGAATTGAAATCTCTGTTATTTGAGGATTTGCATTCATTCATGGAGTCTCTGCCGCCAGATTTTATTGCTATTATGCGTGCAGATGCACTGATAAGGTCAATTATTAGAAAGATGGATGTCTCACGGGTCATGAGGTTGCTAACTTACACCAAATATGCTGTGTATGGTGGTCTGTGTCCAAAATTGAATGAAGGGGAATCACGTAAAATACTCGGAACAAACTTCTATTTTGCTGTGAAAGCTGGTTTTTTCAGTTTCATATCAACGTTAAAATATGTTCGAATCCTAATAACAGTCCTTATAGGGGCCAATAATGTTATCCCTTGGCAGCAGAAGTTGAAAAGTGTACGGAGTTACTTGTATAGTAAGATAAATTATGACTCTTTGGGCTTCTTGGTGCATTCTGTTTTTCTTCTTTTATGCATCCGTCCTGCATTGTTCTAA 1629 0.4254 MTPKTFNFPAKRTTALFLLTATAAAAAAAQTTNSAVLSHLPSLSADKAGGEIHGLLRTARAVSTVASTVVDYEFSLRGLKKDSDQYRLTISQVHLRSAKRFLKLCEANKGFYVKAGQFVAAQKVLPTEYSSTLSSLQDRVAPVPFKIVREVLKNSLGPNFSDMFLSIDEQPVAAASIAQVHRAVLKSGYDVAIKLYPQYKLEWLPLAFAKSMSSELDFVQEARNSEIAAKTFRNNKMVKIPHVFWDLTTRLVLTMQFCAGHKIDDLDFLNQIGVDPEKVAKSLIQLFAEMIFVHGYIHGDPHPGNILVSPEGCNGFSLVLLDHAVYTILDEEFRKDFCMLWEALILKDSMKTLWFGERLGSGKYSRYLPIIFTGTTIESKYAVGISIEEKEALKRELKSLLFEDLHSFMESLPPDFIAIMRADALIRSIIRKMDVSRVMRLLTYTKYAVYGGLCPKLNEGESRKILGTNFYFAVKAGFFSFISTLKYVRILITVLIGANNVIPWQQKLKSVRSYLYSKINYDSLGFLVHSVFLLLCIRPALF* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0761 542 SUPERFAMILY Protein kinase-like (PK-like) 137 349 IPR011009 -
Vra6g0761 542 Gene3D Transferase(Phosphotransferase) domain 1 168 332 - -
Vra6g0761 542 PANTHER ABC1 FAMILY PROTEIN 195 473 - -
Vra6g0761 542 PANTHER ABC1 FAMILY PROTEIN 36 195 - -
Vra6g0761 542 CDD ADCK1-like 135 360 IPR045307 -
Vra6g0761 542 Pfam ABC1 atypical kinase-like domain 195 351 IPR004147 -
Vra6g0761 542 PANTHER AARF DOMAIN CONTAINING KINASE 1 (PREDICTED) 195 473 - -
Vra6g0761 542 PANTHER AARF DOMAIN CONTAINING KINASE 1 (PREDICTED) 36 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0761 Vra-Chr6 7387810 7395581 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0761 K08869 - gmx:100786615 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0761 6 7387810 7395581 Vra6g0761 6 7387810 7395581 ECH
Vra3g0863 3 8750910 8755344 Vra6g0761 6 7387810 7395581 PCT