Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0760 ATGGTTCTCTCCAAAACTGCATCGGAGACGGATGTTTCTGTCCATTCAACCTTCGCTTCTCGCTATGTGCGCACAATTCTTCCCAGATTCAAGATGGGAGAGCAATCGATCCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGCTGATGTTAGATGGAAATCCGAGGCTGAACCTGGCATCGTTTGTGACGACGTGGATGGAGCCTGAATGTGACAAACTCATAATGGCTGCCATTAACAAAAACTATGTGGACATGGATGAGTACCCTGTAACCACTGAACTCCAGAACCGTTGCGTTAACATGATAGCTCACCTTTTCAATGCACCACTCGAAGAGTCAGAACCTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTCAAAAGGAGATGGCAGAATAGAAGGAAACAAGAAGGGAAGCCTTGTGATAGTCCCAATATCGTTACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCGAGGTACTTTGAAGTGGAGTTGAAAGAGGTGAAGCTGAGTGATGGATACTTTGTAATGGANCCTGAGAAAGCAGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTTTGAACGGAGAGTTTGAAGATGTCAAGCGCTTAAATGATCTCCTACTAGAAAAGAATCAGACAACTGGATGGGATACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCGTTTCTTTATCCAGAGCTTGAGTGGGACTTTCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGNTCTAGTCTATGCTGGAATTGGTTGGGTCATTTGGAGAACCAAGGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTATCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCCCAGTACTACCAACTAATTCGATTGGGTTTTGAGGGATACAAAATGGTGATGGAAAACTGCAGAGACAACATGGCAGTGCTTAAGGAAGGTCTAGAGAAAACTGAAAAGTTCGACATTGTGTCTAAAGAAATCGGTGTCCCATTGGTGGCCTTCACTTTGAAGGATCATAGCCACTTCAATGAGTTCCAAATCTCTGACCTGCTGAGGCGCTATGGATGGATAGTGCCAGCATACACTATGCCTCCAGATGCAGAACATGTCACAGTGCTTCGTGTTGTGGTTAGGGAGGACTTCTCTCGCACCCTTGCGGAGCGTCTTGTCACTGATCTCACCAAAGTGGTGCGCGAGCTGGAGCTGCTTCCTGCTAGGGTAATCAGCAGCACCGTAACGACTGGAGAAGATGGTGAGGTCACTGAGGGAAAAGTATTGGTTGCCAAGAAGAGTGAATTAGAGACACAGAGGGCAATCACTTCAGCTTGGAAGAAGTTTGTGATGGAGAAGAAGAAGATGAATGGTGTTTGTTAG 1506 0.4622 MVLSKTASETDVSVHSTFASRYVRTILPRFKMGEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRRWQNRRKQEGKPCDSPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYFVMXPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLLEKNQTTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYXLVYAGIGWVIWRTKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYKMVMENCRDNMAVLKEGLEKTEKFDIVSKEIGVPLVAFTLKDHSHFNEFQISDLLRRYGWIVPAYTMPPDAEHVTVLRVVVREDFSRTLAERLVTDLTKVVRELELLPARVISSTVTTGEDGEVTEGKVLVAKKSELETQRAITSAWKKFVMEKKKMNGVC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0760 501 PANTHER GLUTAMATE DECARBOXYLASE 1 501 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vra6g0760 501 Gene3D - 1 65 - -
Vra6g0760 501 PANTHER GLUTAMATE DECARBOXYLASE 1 501 - -
Vra6g0760 501 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vra6g0760 501 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Vra6g0760 501 Gene3D - 361 448 - -
Vra6g0760 501 Pfam Pyridoxal-dependent decarboxylase conserved domain 37 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vra6g0760 501 Gene3D - 66 360 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0760 Vra-Chr6 7373366 7378276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0760 1 501 Calmodulin-binding Proteins AT5G17330 82.470 0.0 872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0760 6 7373366 7378276 Vra6g0760 6 7373366 7378276 ECH