Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0759 ATGTCGCATCTTTCAACGCTCTTTATGTTTGCCTTCTTCAATTTCGTAGCTGCAACCACTGAGTTCGACTTTGGGACTTTAACATTGGGAAGCCTCAAGCTTCTCGGGGACGCTCACTTTAACAACGGCACCGTAAGCCTCACGCGCGACCTCGCCGTTCCGACCTCCAGCGCCGGCAGAGCTCTTTACTCCCGTCCGGTAAGGTTCCGCCTTCCCGGTAACCGCTCTCCGGCCAGCTTCACCACCTTCTTTTCCTTCTCCGTTGCCAACCTTAACCCATCCTCCATCGGCGGCGGCCTCGCCTTCGTCCTCGCGCCGGACGATGAAACGATCGGCGATGCAGGTGGATTTCTTGGACTTAGCGCAGCCGCCGCCGCCGCGGATGGCGGCGGCGGCGGGTTTATTGCCGTGGAGTTTGATACGCTTATGGACGTAGAGTTTAAGGACATTAATGGGAACCACGTTGGGGTGGACTTAAACAGCGTCGTTTCGAGCGAGGTTGGTGATTTGGAGAGCGTTGGGATCGATCTGAAGAGCGGTGACCTAATTAACGCGTGGATTGAGTTCGATGGATCGAGCAAAGGGTTAAGCGTGTGGGTTTCGTATTCCAATTTGAAACCGAAAGATCCCGTTTTGTCGACGAGCCTCGATGTGGATAAGTATTTGAGTGATTTTATCTATGTGGGGTTCTCAGGTTCTACGCAGGGTAGCACAGAGATTCACAGAATAGAGTGGTGGAGCTTTGGTTCTTCTTTTGATGCTGCGGCAGGGGCGGCCCCACCGCCTCCGCCGGCGATGAGTCTGATGAACCCGACGGCGAATGTGGTGAAGTCGGCGCCTCCTTCTCCGGCTCCTTCTAACAGTGAAGAGAAAGAGAGCAAAAGCAAATCGTCTTGCCACAATGGGTTGTGTAAGCAGAATTTAGGAGCGGTTGCTGGTGTTGTTAGTGCCGGGGCTTTTGTTTTGGCTATTTTTGCCGGTGCATTGATTTGGTTTTACTCTAAGAAGGTTAAGCGTGTTAACAAGTTTGATTCGCTTGGTCCGGAGATCATTAAAATGCCGAAGCAGTTTACCTATAAGGAGCTGAAGTCTGCTACAAAGTGTTTCAATGCGAATAGGATCATTGGTCATGGTGCGTTTGGGACTGTGTATAAGGGGGTTTTGCCTGAAAACGGGGACACTGTTGCGGTGAAGAGGTGCAGCCATAGTAGTCAGGGGAAGAATGAATTTTTGTCTGAGTTGTCTATCATTGGGAGCCTGAGGCATCGGAATCTGGTTCGGCTTCAAGGGTGGTGCCATGAAAAAGGGGAGATTCTGCTGGTGTATGACTTGATGCCCAATGGGAGTTTGGACAAGGCTTTGTTCGAGGCTAGGACACCTCTTCCCTGGTCTCACCGGCGCAAGATTTTGTTGGGCGTGGCCTCTGCCTTGGCCTACTTGCATCAAGAGTGTGAGAATCAGGTGATTCACAGGGACATCAAGACTAGTAATATAATGTTGGATGAAGGGTTCAATGCCAGGTTGGGAGATTTTGGTTTGGCGAGGCAAACGGAGCATGATAAGTCGCCGGATGCCACAGTGGCTGCTGGGACAATGGGGTACCTGGCACCCGAGTATCTCCTTACAGGAAAGGCTACAGAGAAAACTGATGTGTTCAGCTATGGTGCAGTGGTTCTTGAGGTGGCAAGTGGGAGAAGACCGATAGAGAGGGATGGGAATGGAGGTGGTAAAGGTGGAATTAGCTGCAATTTGGTAGAATGGGTATGGAATTTGCACCGGGAAGGAAGGTTGCAGTTGGCGGCTGATGCAAGGCTGGAAGGGGAGTTTGATGAGGCGGAGATGAGGAGGGTACTGTTGGTTGGGTTAGCTTGCTCTCACCCTGATCCATTGGCTAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGGGAAGCTGAAGTGCCTATTGTTCCAAGAACCAAGCCTTCCACAGCTTTCAGTACTTCCCACTCTTACTTACTGATGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACATCCACATCAGAGAACAGCTTCAATCTTGGAGATATAGTCTGA 2100 0.5105 MSHLSTLFMFAFFNFVAATTEFDFGTLTLGSLKLLGDAHFNNGTVSLTRDLAVPTSSAGRALYSRPVRFRLPGNRSPASFTTFFSFSVANLNPSSIGGGLAFVLAPDDETIGDAGGFLGLSAAAAAADGGGGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLESVGIDLKSGDLINAWIEFDGSSKGLSVWVSYSNLKPKDPVLSTSLDVDKYLSDFIYVGFSGSTQGSTEIHRIEWWSFGSSFDAAAGAAPPPPPAMSLMNPTANVVKSAPPSPAPSNSEEKESKSKSSCHNGLCKQNLGAVAGVVSAGAFVLAIFAGALIWFYSKKVKRVNKFDSLGPEIIKMPKQFTYKELKSATKCFNANRIIGHGAFGTVYKGVLPENGDTVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIERDGNGGGKGGISCNLVEWVWNLHREGRLQLAADARLEGEFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRTKPSTAFSTSHSYLLMSLQDSVSDCDGIITISTSTSENSFNLGDIV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0759 699 MobiDBLite consensus disorder prediction 263 297 - -
Vra6g0759 699 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Vra6g0759 699 ProSiteProfiles Protein kinase domain profile. 369 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g0759 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 255 IPR013320 -
Vra6g0759 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Vra6g0759 699 SMART serkin_6 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g0759 699 CDD STKc_IRAK 375 642 - -
Vra6g0759 699 SUPERFAMILY Protein kinase-like (PK-like) 351 669 IPR011009 -
Vra6g0759 699 Pfam Legume lectin domain 21 255 IPR001220 GO:0030246
Vra6g0759 699 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 18 692 - -
Vra6g0759 699 Gene3D Phosphorylase Kinase; domain 1 333 444 - -
Vra6g0759 699 Pfam Protein kinase domain 370 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g0759 699 PANTHER - 18 692 - -
Vra6g0759 699 MobiDBLite consensus disorder prediction 271 288 - -
Vra6g0759 699 CDD lectin_legume_LecRK_Arcelin_ConA 20 252 IPR001220 GO:0030246
Vra6g0759 699 Gene3D - 17 259 - -
Vra6g0759 699 Gene3D Transferase(Phosphotransferase) domain 1 445 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0759 Vra-Chr6 7370078 7373103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0759 8 681 Receptor kinase-like Gene Family AT3G53380 68.467 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra6g0759 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0759 - - gmx:100793157 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0517 10 11077453 11081444 Vra6g0759 6 7370078 7373103 PCT