Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0740 ATGATATTCGAAGAACTGCGAGATCTTAAAGATCCAGCCCATTGGATCTGTTCCATCAAATCGGGGAACCTCCAATTTCAGGAAGGAAAGGAAGGATTTATTGGAAATTTGAAGGTAAAAGTGATCAAAGGCACAGATTTAGCTATCAGAGATATGATGACCAGTGATCCATATGTTATCTTCACACTTGGCCAACAGACTGTTCAGACAACTGTAATAAAGAGTAATTTGAATCCAGTCTGGAATGAAGAACTTATGCTGTCTGTTACTCGGCCATTTGGATTATTGAATTTGAAGGTATTTGATTATGACTTATTTTCATCTGATGATATAATGGGGGAAGCAGACATTGATCTTCATCCCCTGATTACATCTGCAATGGCNTATGGAGATCCTAGCATGTTTGATGATATGCAGATAGGAATATGGATGAAATCTCAGGACAATGCGCTTATAGATGATAGCGAAGTCAAAATTGTTGGTGGAAAAGTTAAACAGGAGATATTAATCAAGCTCCAGAACGTTGAATCTGGAGAATTAGAGTTAGCACTTGAGTGGATGCCATTAGAGTCTTGA 576 0.3802 MIFEELRDLKDPAHWICSIKSGNLQFQEGKEGFIGNLKVKVIKGTDLAIRDMMTSDPYVIFTLGQQTVQTTVIKSNLNPVWNEELMLSVTRPFGLLNLKVFDYDLFSSDDIMGEADIDLHPLITSAMAYGDPSMFDDMQIGIWMKSQDNALIDDSEVKIVGGKVKQEILIKLQNVESGELELALEWMPLES* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0740 191 Gene3D C2 domain 33 191 IPR035892 -
Vra6g0740 191 ProSiteProfiles C2 domain profile. 20 133 IPR000008 -
Vra6g0740 191 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 21 190 - -
Vra6g0740 191 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 21 190 IPR044518 GO:0005096|GO:0005543
Vra6g0740 191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 35 179 IPR035892 -
Vra6g0740 191 SMART C2_3c 36 131 IPR000008 -
Vra6g0740 191 Pfam C2 domain 35 126 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0740 Vra-Chr6 7119368 7122217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0740 28 190 C2H2 Transcription Factor Family AT4G21160 71.779 3.31e-82 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0740 K12486 - gmx:100777084 265.774