Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0675 ATGGCTTCAACCTCCCACAACAACACCAACAAAGTTAACTCTTCTTCTTGGACACCCATGCAGAACAAGCAATTCGAAAGAGCACTTGCTTTCTACGATCAAGACACCCCAGATCGCTGGCAGAACATAGCCAACATGCTTGGTGATAAATCTGTTGAGGAAGTTAAGAAACACTATGAAATCCTTGTCGAAGACCTTAGGCATATAGAATCTGGTCGTGTTCCAATCCCCAGTTACAACAACTCCACTCATCATCAACCTAATCATCAAGAGAGCTTATATGGCAGGCCTCTAAAGTATCTCAATCAGCAGTGA 315 0.4317 MASTSHNNTNKVNSSSWTPMQNKQFERALAFYDQDTPDRWQNIANMLGDKSVEEVKKHYEILVEDLRHIESGRVPIPSYNNSTHHQPNHQESLYGRPLKYLNQQ* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0675 104 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Vra6g0675 104 Gene3D - 8 76 - -
Vra6g0675 104 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Vra6g0675 104 MobiDBLite consensus disorder prediction 73 104 - -
Vra6g0675 104 MobiDBLite consensus disorder prediction 75 90 - -
Vra6g0675 104 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Vra6g0675 104 SMART sant 13 65 IPR001005 -
Vra6g0675 104 CDD SANT 16 59 IPR001005 -
Vra6g0675 104 PANTHER PROTEIN RADIALIS-LIKE 3 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0675 Vra-Chr6 6304602 6306200 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra6g0675 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0675 - - pvu:PHAVU_008G192200g 150.214