Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0639 ATGGAGAACAAAATGAGCGCAGTGTTTGTGATGGGGCTTGTCTTTATAAGCCTTATCTCAGTTACATCTGCTATTTCTGGAACTGCAACTTATTACACAGTTTACGAACCTTCTGCATGCTATGGGTACCAAGATCAGGGAACGATGATAGCTGCTGCAAGCGACGCAATATATGCGAACGGAGCTGCATGTGGTCAAATGTACAAGATCACGTGCACAGGTGCCACCAACCAAGGTGTGCCTCAGCCATGCAAGGGTGGCAGTGTTACTGTGAAGATCGTTGATCGTTGTCCTTCCCCAGGTTGCCAAGCCACCATTGATCTCTCCCAAGAAGCTTTCTCCGCAATCGCTGACCTCAATGCTGGAAAAATTCAAATTGAATACAACAAGGTGTAA 396 0.4646 MENKMSAVFVMGLVFISLISVTSAISGTATYYTVYEPSACYGYQDQGTMIAAASDAIYANGAACGQMYKITCTGATNQGVPQPCKGGSVTVKIVDRCPSPGCQATIDLSQEAFSAIADLNAGKIQIEYNKV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0639 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 131 IPR044206 GO:0009627|GO:0048046
Vra6g0639 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Vra6g0639 131 SMART dpbb_1 50 128 IPR007112 -
Vra6g0639 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Vra6g0639 131 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
Vra6g0639 131 Gene3D - 23 131 IPR036908 -
Vra6g0639 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN ISOFORM X2 3 131 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0639 13 131 Expansin Gene Family AT4G01630 31.690 2.34e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0639 - - vra:106764512 265.388