LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra6g0637	ATGCATCACTTCTTCTACAATAAATACTCTTTGCTGGAACAGTCATCTACACAAATTTATGTTAGCCCCTTCAAATTCTGCTTCGCATTTCATCTCATAGGAGTGACAAATATGGTCTCTTTAAGGCCATGCCTTCTTTTCATTCTTCTCTGCATTGCAATGATTGAACACGCACATTCCAACAATAATAGGAAGACTTACATTGTCTACATGGGTGATCACCCTAAGGGCATGGACCTCACTTCCGTACCTTCTCTTCATACCACCATGGCTCAAAATGTCCTTGGCAGTGATTTCAAACCCGAAGCTGTAATCCACAGCTACAAGAACTTCAATGCGTTCGTCATGAAGTTAACAGAAGAGGAGGCTAAAATAATGGAAGAAATGGAGAACGTTGTCTCTGTTTTCCCAAACGGCAAGAATCGTCTTCACACGACAAGGTCGTGGAACTTCTTAAGGTTTCCCCAGAATGTTAATAGAGAAACCTCAGAGAGTGACATAATTGTGGGAGTAATAGACAGTGGTGTTTGGCCGGAGTCTGAGAGCTTCAGTGACAAAGGATTTGGTCCTCCACCGGCCAAGTGGAAAGGATCATGTCATAACTTTACCTGCAACAACAAAATAATTGGCGCAAAGTACTTCAATCTGGAGAAAGAGTTCGCAAAAGATGATATAATATCTCCAAGAGATGCAGAAGGTCATGGATCACATTGTGCATCCACAGTTGCTGGAAACTCGGTTAACTCGGTGAGTGTATTTGGCTTAGCCTCAGGGACTGCCCGTGGAGGAGTTCCGTCTGCCCGAATCGCTGTGTACAAAGTATGTTGGAAGACAGGAAGNTGTGGCGATGCNGACACCCTTGCAGCATTTGATGAAGCTATCAGTGATGGAGTAGACGTAATTTCTATTTCAACTGGACTGGGAGNAGTAGTCTACGTTCCGTATTTCAAAGATTCAAATAATATAGGAAGTTTTCATGCAATGAAAAAAGGGATACTAACCTCAAATTCTGCCAATAATTTGGGTCCAGGTCTTTCCTCAATGACAAATTATCCACCATGGTTACTTTCTGTGGCTGCAAGCGCTTTCGACAGAAAGATTGTCACCAAGGTGAAGCTGGGCAATGGCGCGGTATATGAGGGGATTTCGATCAACACATTTGATCTTAATGGAAAACCGTATCCACTTGTATATGGTGGAGATGTACCTAATATTGCTGGTGGACATAACAGCTCGACATCCAGGTTTTGCGTAAAGGATTCTTTGGATAAACATTCAGTAAAGGGAAAGATTGTTCTGTGTGAAAGAATTCAGAGATCTAAAGATATAGGGATTTTATCTGGGGCAGCCGGTATTATATTTGGAAATAATTACCCTAAAGATTTGCTCCGACCATATGCCTTGCCTGCTTTGGAGGTTACTCAGTGGGATCAAAGACTCATACATTCCTATTTAAATTCAAACAGGAATGCAACAGCCACAATATTTAAGAGTGAAGAAGTAAACGATGGACTGATCCCTTTCATATCTTCATTCTCCTCTAGAGGTCCAAATCCAATTACACCAAATACTCTAAAGCCTGACATTGCTGCTCCTGGAGTTGAAGTCATAGCTGCATGGTCTCCAATTGATCCAATTTCAGATGTTAAAGGTGACAAAAGAAAAGTACTATATAATGTAATTTCAGGCACTTCAATGGCATGCCCTCATGCTACTGCAGCAGCTTCGTATGTCAAATCATTTCATCCCAATTGGTCTCCTGCCATGATCAAGTCTGCAGTGATGACCACTGGTAACAATAATATATAA	1809	0.4151	MHHFFYNKYSLLEQSSTQIYVSPFKFCFAFHLIGVTNMVSLRPCLLFILLCIAMIEHAHSNNNRKTYIVYMGDHPKGMDLTSVPSLHTTMAQNVLGSDFKPEAVIHSYKNFNAFVMKLTEEEAKIMEEMENVVSVFPNGKNRLHTTRSWNFLRFPQNVNRETSESDIIVGVIDSGVWPESESFSDKGFGPPPAKWKGSCHNFTCNNKIIGAKYFNLEKEFAKDDIISPRDAEGHGSHCASTVAGNSVNSVSVFGLASGTARGGVPSARIAVYKVCWKTGXCGDADTLAAFDEAISDGVDVISISTGLGXVVYVPYFKDSNNIGSFHAMKKGILTSNSANNLGPGLSSMTNYPPWLLSVAASAFDRKIVTKVKLGNGAVYEGISINTFDLNGKPYPLVYGGDVPNIAGGHNSSTSRFCVKDSLDKHSVKGKIVLCERIQRSKDIGILSGAAGIIFGNNYPKDLLRPYALPALEVTQWDQRLIHSYLNSNRNATATIFKSEEVNDGLIPFISSFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPIDPISDVKGDKRKVLYNVISGTSMACPHATAAASYVKSFHPNWSPAMIKSAVMTTGNNNI*	603

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra6g0637	602	Pfam	Subtilase family	165	598	IPR000209	GO:0006508\|GO:0008236
	Vra6g0637	602	PANTHER	PUTATIVE-RELATED	54	598	-	-
	Vra6g0637	602	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	54	598	IPR045051	-
	Vra6g0637	602	CDD	PA_subtilisin_like	371	495	-	-
	Vra6g0637	602	Gene3D	Peptidase S8/S53 domain	166	600	IPR036852	GO:0004252\|GO:0006508
	Vra6g0637	602	SUPERFAMILY	Subtilisin-like	143	599	IPR036852	GO:0004252\|GO:0006508
	Vra6g0637	602	PRINTS	Subtilisin serine protease family (S8) signature	164	183	IPR015500	-
	Vra6g0637	602	PRINTS	Subtilisin serine protease family (S8) signature	230	243	IPR015500	-
	Vra6g0637	602	PRINTS	Subtilisin serine protease family (S8) signature	562	578	IPR015500	-
	Vra6g0637	602	CDD	Peptidases_S8_3	143	597	IPR034197	-
	Vra6g0637	602	Gene3D	-	364	502	-	-
	Vra6g0637	602	ProSiteProfiles	Serine proteases, subtilase domain profile.	148	602	-	-
	Vra6g0637	602	ProSitePatterns	Serine proteases, subtilase family, serine active site.	563	573	IPR023828	-
	Vra6g0637	602	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	51	144	IPR037045	-
	Vra6g0637	602	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	234	244	IPR022398	-
	Vra6g0637	602	Pfam	Peptidase inhibitor I9	66	144	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra6g0637	Vra-Chr6	5871716	5875120	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra6g0637	38	599	Subtilisin-like Serine Gene Family	AT5G03620	48.382	2.33e-165	482

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra6g0637	-		-	vra:106763308	1219.53