Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0635 ATGAACACATTCATCAGCTCCTCAAAAAGTTCTAAGCTTCTCACCTTGATCTTCTGTGAGAACATGATTTCTCTAAGGCCTGGCCTTCTTTTAACACTCATCTTCAGTCTGATAATTAATCAGACATATTCCAACAAAGATAGGAAGACTTACATTGTCTACTTGGGTGACCACCCTAAAGGCATGGACTCAACATCCTTACCTTCCCTTCATATGACCATGGCACAAAATGTTCTTGGCAGCGACTTTGAACCAAAAGCTATACTTCATAGTTACAAGAAAAGCTTTAATGGATTTGTTATCAAGTTAACGCAGGAGGAAGCGGGAAGAATGGCAGAAATGGACAGTGTTGTCTCTGTTTTCCCAAACAAGAAGAATCATCCGCACACAACTAGATCATGGGACTTCATAGGCTTTTCACAGCAAATCCTAAGAACAAATTTAGAGAGTGATATAATTGTTGGAGTAATAGACACGGGAGTTTGGCCAGAGTCCAAGAGCTTCAGTGACGAAGGATTTGGTCCTCCACCAAGTAAATGGAAAGGATCATGCCACAACTTTACTTGTAACAACAAAATAATTGGAGCAAAGTATATCAATATTGAAGGTGACTATGACAAAGACGATATCATATCTCCTAGAGATGCACAAGGCCACGGGTCGCACACTGCATCCACAATTGCTGGAAATTTGGTTAAATCTGCGAGTCTACTAGGTTTTGCCTCAGGAACAGCCCGTGGAGGAGTCCCATCAGCACGCATTGCCATATACAAAGCATGTTGGCTCAAAATAGGTTGTCCTGAGGCTGAAACTCTTGCAGCATTTGATGAAGCAATTGCTGATGGAGTTGATATAATCTCGATTTCAACTGGGTACAACAACATAGAGATCTTTCCCTATTTTCAAAGTGCGTATGATATAGGAAGTTTCCATGCAATGAAGAGAGGCATATTAACGTCAAATTCAGCCAATAATTTGGGTCCTCGATTTTCCTCTATGACCACTTACCCACCCTGGATACTCTCTGTGGCTGCTAGCACTATTGACAGAAAGTTCCTCACCAAAGTGCAATTGGGCAACGGCGTAGTTCTTGAGGGGGTTACAATTAACACCTTTGATCTAAAAAAGAAAATGTATCCACTGATATACGCTGGAGATGTACCCAACGCTGCGGACGGATATAATAGTTCCATATCCAGGTTTTGCTTCGACAACTCTGTCGATAAACATTTAGTAAAAGGAAAGATCGTTCTGTGTGACAGAATTGGGTCTCCTAGCGATGTTGGGGTTTTGTCTGGAGCTGCTGGGATGCTTGTTGGAGCCACTGATGCAAAAGATGCGCCAACAACATATGCACTACCCGCAGCTTTCATTAGTCTAAGGAAATTTAACCTCGTACATTCTTACATGATTTCATCGAGAAATTCAACTGCTACAATATTTAGGAGTGACGAAGACAATGACTCACAAACCCCTTTCGTAGTTTCGTTTTCATCAAGAGGTCCAAATCCAATTACCCCAAACACTCTCAAGCCTGATCTTGCTGCACCGGGAGTTAACATTCTAGCTGCATGGTCTCCAGTGTATCCAATTTCAACATTTAAAGGTGACAAAAGAGCAGTGCAATACAACATAGAGTCCGGCACTTCAATGGCTTGCCCTCATGCAGCTGCAGCTGCTGCATATGTCAAATCATTTCACCCCAATTGGTCCCCTGCTATGATCAAGTCTGCATTAATGACCACAGCTACACCAATGAGTCCTACTCTTAATCCTGAAGCTGAATTCGCATATGGGGCAGGGCAAGTTAATCCTGTTAAAGCAGCAAATCCTGGTTTAGTGTACGATATTAGTGAAGCAGATTATGTGAAGTTCTTGTGTGGGGAGGGTTATACAGATAAAATGCTTCGGATACTCACTAAAGATCATAGTAGATGTAGTAAACATGCCAAGGAAGAAGCTGTGTATGACCTCAATCTCCCATCATTTGCTCTGTACGTAAATGTCTCATCTTTCAGCCGTGTTTATCATAGAACGGTTACGAATGTGGGATCAGAAAGATCTCGTTATAAAGCCAAAGTGGTATCACCATCTTTGCTGGATATTCAGGTGAAACCAAATGTTCTATCCTTCACAGCAATTGGGCAGAAGAAGTCATTCTCAGTCATAATTGAAGGGAGTATTAACGCAGATATACTGTCTGCTTCTCTGGTTTGGGATGATGGCACTTTTCAAGTTAGAACACCAATTGTAGTATATACTGATCGAAAAGTTATTCCATGGTCTGATGAATAA 2295 0.4157 MNTFISSSKSSKLLTLIFCENMISLRPGLLLTLIFSLIINQTYSNKDRKTYIVYLGDHPKGMDSTSLPSLHMTMAQNVLGSDFEPKAILHSYKKSFNGFVIKLTQEEAGRMAEMDSVVSVFPNKKNHPHTTRSWDFIGFSQQILRTNLESDIIVGVIDTGVWPESKSFSDEGFGPPPSKWKGSCHNFTCNNKIIGAKYINIEGDYDKDDIISPRDAQGHGSHTASTIAGNLVKSASLLGFASGTARGGVPSARIAIYKACWLKIGCPEAETLAAFDEAIADGVDIISISTGYNNIEIFPYFQSAYDIGSFHAMKRGILTSNSANNLGPRFSSMTTYPPWILSVAASTIDRKFLTKVQLGNGVVLEGVTINTFDLKKKMYPLIYAGDVPNAADGYNSSISRFCFDNSVDKHLVKGKIVLCDRIGSPSDVGVLSGAAGMLVGATDAKDAPTTYALPAAFISLRKFNLVHSYMISSRNSTATIFRSDEDNDSQTPFVVSFSSRGPNPITPNTLKPDLAAPGVNILAAWSPVYPISTFKGDKRAVQYNIESGTSMACPHAAAAAAYVKSFHPNWSPAMIKSALMTTATPMSPTLNPEAEFAYGAGQVNPVKAANPGLVYDISEADYVKFLCGEGYTDKMLRILTKDHSRCSKHAKEEAVYDLNLPSFALYVNVSSFSRVYHRTVTNVGSERSRYKAKVVSPSLLDIQVKPNVLSFTAIGQKKSFSVIIEGSINADILSASLVWDDGTFQVRTPIVVYTDRKVIPWSDE* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0635 764 Pfam Peptidase inhibitor I9 50 125 IPR010259 -
Vra6g0635 764 Gene3D - 349 487 - -
Vra6g0635 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 754 IPR045051 -
Vra6g0635 764 Pfam Subtilase family 150 601 IPR000209 GO:0006508|GO:0008236
Vra6g0635 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Vra6g0635 764 Gene3D Peptidase S8/S53 domain 151 622 IPR036852 GO:0004252|GO:0006508
Vra6g0635 764 CDD Peptidases_S8_3 127 584 IPR034197 -
Vra6g0635 764 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Vra6g0635 764 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Vra6g0635 764 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Vra6g0635 764 SUPERFAMILY Subtilisin-like 128 613 IPR036852 GO:0004252|GO:0006508
Vra6g0635 764 ProSiteProfiles Serine proteases, subtilase domain profile. 133 609 - -
Vra6g0635 764 PANTHER PUTATIVE-RELATED 38 754 - -
Vra6g0635 764 CDD PA_subtilisin_like 356 480 - -
Vra6g0635 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 36 129 IPR037045 -
Vra6g0635 764 Pfam Fibronectin type-III domain 657 752 IPR041469 -
Vra6g0635 764 Gene3D - 626 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0635 Vra-Chr6 5841462 5845242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0635 30 753 Subtilisin-like Serine Gene Family AT3G46850 45.357 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0635 - - gmx:100787973 1256.51