Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0598 ATGGGGAGGTTGTTTGTGGTTCATCTCGAGGGGAAGGTCTATAGCTGCAAACACTGCCGTACCCATCTTGCTCTCTATGAAGACATCGTTTCCAAGTCTTTCCACAGCAGACATGGGAAAGCTTATCTCTTCAGTAAGGTCGTGAATGTTTCTGCTGGAGAAAACGAGGACAGACAGATGCTTACCGGGATGCATACTGTGGCTGACATTTTCTGTGTGGGGTGTGGATCAATTGTGGGTTGGAAATATGAGACAGCTCATGAAAAAAGCCAGAAGTACAAGGAAGGAAAATCTGTACTTGAACGGTACAAGGTGTCAGGTCCTGATAGCTGCAATTATTGGGTCGGCCATGAAGCACATGGTGGAAGTGATGCAGATGACGCTTAG 387 0.4677 MGRLFVVHLEGKVYSCKHCRTHLALYEDIVSKSFHSRHGKAYLFSKVVNVSAGENEDRQMLTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERYKVSGPDSCNYWVGHEAHGGSDADDA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0598 128 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 128 IPR039058 -
Vra6g0598 128 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Vra6g0598 128 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
Vra6g0598 128 PANTHER PROTEIN YIPPEE-LIKE 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0598 Vra-Chr6 5399415 5402019 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0598 - - gmx:100780394 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0598 6 5399415 5402019 Vra6g0598 6 5399415 5402019 ECH
Vra3g1219 3 12945141 12946997 Vra6g0598 6 5399415 5402019 PCT