Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0597 ATGGCATCTTTCATCACTCCACTCATCCTTCTCTTCATCTCCGCTATCTTCCTTTTCCTCCATCGCCGATCCCGTTACCGCCGCCTCCGCCTCCGCCTCCCCCCGGGCACCCTCGGCCTCCCCTTCGCCGGAGAGACCCTGCAGCTCATATCAGCCTACAAGACCGACAACCCCGAACCATTCATCGACCACCGCGTCCATCGCTACGGCCCAATTTTTACCACCCATGTCTTTGGCGAACCCACCGTCTTCTCCGCAGACCCGGAGACCAACCGCTTCATTCTGCTCAACGAAGGGAAACTCTTCGAATGCAGCTACCCCGGTTCCATATCCAACCTCCTTGGAAAACACTCTCTGCTTCTCATGAAGGGCTCTCTTCACAAGAAAATGCACTCCCTCACCATGAGTTTCGCCAACTCTTCCATCATCAAGGATCACTTGCTCGTTGACATAGACCGTCTCATCCGGCTCAATCTCGATTCTTGGTCAGACCGGATTTTTCTCATGGAAGAAGCCAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGTTGATGAGCTTTGATCCAGGTGAATGGACTGAGACTCTAAGGAAAGAGTACGTTCTTGTGATAGAAGGATTTTTCACTCTTCCATTGCCTCTCTTTTCGACCACCTACCGCAGAGCCATCAAGGCCAGGACGAAGGTGGCAGAGGCATTAACGTTGATAGTGAGGGAGAGAAGAAAAGAAAGCGAAAAGGAGGAGAAAAAGAATGACATGCTAGGGGCATTGTTGGCCTCCGGCAACAACTTTTCCGACGAGGAAATAGTTGATTTTATGTTGGCTTTGCTCGTCGCCGGTTATGAAACCACCTCCACCATAATGACTCTTGCCGTCAAGTTCCTCACGGAGACTCCTCTAGCATTGGCACAACTCAAGGAAGAGCATGACCAGATCAGAGCCAAAAAGAGTCACCCAGAAGAACCACTGGAGTGGACAGATTACAAGTCAATGGCGTTTACTCAATGTGTTGTGAATGAGACTTTGAGGGTTGCAAACATTATTGGTGGGATATTTAGAAGAGCAATGACAGACATAAACATTAAAGGTTACACTATTCCAAAGGGATGGAGGGTATTTGCTTCATTTCGTGCTGTACATCTAAACCCCGATCACTACAAAGATGCGCGCACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAGCAACAAGCCCTGGGAATGTATATACCCCTTTTGGAGGAGGACCACGTCTTTGCCCTGGTTATGAGCTTGCCAGAGTGGTGCTCTCTGTCTTTCTTCACCGTACTGTCACCCGTTACAGTTGGTTTCCTGCAGAAGAAGACAAGTTGGTGTTTTTCCCAACCACAAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGAAGAGAGGAGTCCAGACCAAGTAATCAAACATGGAAGGGCAAAGAAGAAGAATCAGAGATTGTAGATTAG 1476 0.4864 MASFITPLILLFISAIFLFLHRRSRYRRLRLRLPPGTLGLPFAGETLQLISAYKTDNPEPFIDHRVHRYGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKKMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWSDRIFLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLIVRERRKESEKEEKKNDMLGALLASGNNFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKSHPEEPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWRVFASFRAVHLNPDHYKDARTFNPWRWQSNSEATSPGNVYTPFGGGPRLCPGYELARVVLSVFLHRTVTRYSWFPAEEDKLVFFPTTRTQKRYPIIVKRREESRPSNQTWKGKEEESEIVD* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0597 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Vra6g0597 491 MobiDBLite consensus disorder prediction 471 491 - -
Vra6g0597 491 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PANTHER CYTOCHROME P450 26 8 469 - -
Vra6g0597 491 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 PANTHER CYTOCHROME P450 90A1 8 469 - -
Vra6g0597 491 Pfam Cytochrome P450 210 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0597 491 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0597 Vra-Chr6 5371825 5382667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0597 122 471 Cytochrome P450 AT5G05690 81.197 0.0 586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0597 6 5371825 5382667 Vra6g0597 6 5371825 5382667 ECH
Vra3g1218 3 12925786 12931232 Vra6g0597 6 5371825 5382667 PCT