Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0539 ATGGTTTCCAAAGAGCAAAAGAGAGCAGCACTGCATGAGCAGCTGCAACATCTTCGATCTCTTACTAACTCTCATGCTCTAAACGAAAGCTCGATTGTTATCGATGCATCGAAGTATATTGAAAAGTTAAAGCAAAAGGTAGAAAGACTGAATGAAGAGATAGCTTCTGCAGAAACTTCAACTGCACACGACCCATTGCCTATGGTTACAGTAGAAACCTTGGAAAAGGGATTTCTTATAAATGTTTACTCAGCAAAAGGGTGTTCAGGTCTGCTTGTTTCCATATTGGAGGTCTTTGAAGAGATGAGACTAACTGTGCTGGAAGCTAGGGTTTCGTGTACAGACACTTTTCGATTTCAAGCTGTTGGAGAAAATGAAGAAGAAAGAGACACCATTGATGCACATACTGTCAAAGAAGCTGTAGGACAAGCAATAAAGAACTGGAGCAAAGGTGGCGATGAAGAGTAA 468 0.4081 MVSKEQKRAALHEQLQHLRSLTNSHALNESSIVIDASKYIEKLKQKVERLNEEIASAETSTAHDPLPMVTVETLEKGFLINVYSAKGCSGLLVSILEVFEEMRLTVLEARVSCTDTFRFQAVGENEEERDTIDAHTVKEAVGQAIKNWSKGGDEE* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0539 155 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 154 - -
Vra6g0539 155 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 154 - -
Vra6g0539 155 Coils Coil 33 60 - -
Vra6g0539 155 CDD ACT_UUR-ACR-like 90 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0539 Vra-Chr6 4702072 4703712 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0539 - - gmx:100306253 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0672 4 12465162 12466787 Vra6g0539 6 4702072 4703712 ECH
Vra6g0861 6 8827669 8828948 Vra6g0539 6 4702072 4703712 ECH
Vra6g0539 6 4702072 4703712 Vra6g0539 6 4702072 4703712 ECH
Vra2g1529 2 23233979 23235610 Vra6g0539 6 4702072 4703712 PCT