Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0537 ATGATTTGGTATATCTCCTGTATGAAAGCTCCAATGGCCTCTTTCTACTTCCTCTTGCTTCTTCTTGTCGGTGCAACAACTAATACAGCTTCTGGTGCAGACCTATGTACAGACTTTTACTCCTGCACTTGCCCAAACTTGTTAACCATAGTCAAGAAAGGAGTGGCTCAAGCCATTAGAAAAGAACCACGCATGGGGGCTTCCTTACTCCGATTGCATTTCCATGACTGCTTTGTAAACGGTTGTGATGCATCAATACTGTTGGATGATAGTAGCAACTTCGAAGGAGAGAAAACCGCAGCAGCTAACAACCAATCAGCCAGAGGATTCAATGTGATAAACGATATTAAGTGCAGTGTGGAGAAAGAGTGTCCCAAAGTGGTGTCCTGTGCGGATATTCTTGCTCTGGCAGCTCGAGATTCTGTTGTCTATTTAGGAGGACCTTCTTGGGAAGTGGGGTTGGGGAGAAGAGATTCTACAACAGCAAGCAGAAAGGATGCTAATAGTAACCTTCCTGGGCCTTTCCTAAATCTAGCTAATCTCACAAACAATTTTGCTAATCAAGGCCTCTCTGTTACAGACTTGGTTACTCTTTCAGGGGCACATACCATTGGCCTGGCTCAGTGCAAAAATTTCCGAGCACACATCTACAATGACTCCAACGTTGATCCCTCCTACCGGAAGTTCCTGCAGAGCAAATGCCTAAGAAGTGGAAGGGACAATACACTGGAACCCCTTGACCACCAAACTCCAATCCGTTTCGACAATCTATACTTCCAGAATTTGATGAGTAAAAAAGCTCTTCTTCATTCCGATCAGGAGCTGTTCAATGGCAGTTCTACTGATAATCTGGTTAAAAAATACGCTGCCAATACTGCTGCATTCTTTGAAGACTTTGCCAAGGGCATGGTCAAAATGAGTAACATCAAGCCTCTCACAGGAAGCCAGGGAGAGATCAGAATCAATTGCGGGAAAATCAATTAA 984 0.4411 MIWYISCMKAPMASFYFLLLLLVGATTNTASGADLCTDFYSCTCPNLLTIVKKGVAQAIRKEPRMGASLLRLHFHDCFVNGCDASILLDDSSNFEGEKTAAANNQSARGFNVINDIKCSVEKECPKVVSCADILALAARDSVVYLGGPSWEVGLGRRDSTTASRKDANSNLPGPFLNLANLTNNFANQGLSVTDLVTLSGAHTIGLAQCKNFRAHIYNDSNVDPSYRKFLQSKCLRSGRDNTLEPLDHQTPIRFDNLYFQNLMSKKALLHSDQELFNGSSTDNLVKKYAANTAAFFEDFAKGMVKMSNIKPLTGSQGEIRINCGKIN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0537 327 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 ProSiteProfiles Plant heme peroxidase family profile. 34 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 CDD secretory_peroxidase 38 326 IPR033905 GO:0004601|GO:0042744
Vra6g0537 327 Gene3D Peroxidase, domain 2 172 306 - -
Vra6g0537 327 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 PANTHER PEROXIDASE 16 326 - -
Vra6g0537 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Vra6g0537 327 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 SUPERFAMILY Heme-dependent peroxidases 35 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Vra6g0537 327 Pfam Peroxidase 51 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra6g0537 327 Gene3D - 38 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0537 Vra-Chr6 4677544 4679484 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0537 33 327 Peroxidase AT5G05340 58.923 6.37e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0537 K00430 - gmx:100793973 573.163