Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0512 ATGGGGTTCACTGGGGAATTGGTAAGAAGTGTCTTCTCCAAAAATCGTTCTGATGGGTCGCATGAAACCAAAGTGAAACGCAGTAGTGCTGAAAATAGAAGATGGTTATCTGTTAGGTCGTACTTGTGTGGCGATGAGTTCAATTCAGTCGTTGCAGAGAATGATTCAGCTTCAGTTAAGAGCACTGAAGTCACGGTTTCGCAGTCCATTTTGGAAGACTTGAATGATAAAGGAGACACCGATAGTGAAGAAACTGTGGAGAATGTAACACAGAAAAGGCCAAATTCAGACTCCAAATCATTGACTGAAGAAGAAGCAGCAATTCTTATTCAATCAGCATTTAGAGGCTTCCTGTTGAGGCGTCAAAGTGGAGAAATCAGATCAGAAACAGGAAAAGAGGAGTTCAATTTAGTAACAGAAAGTCCTGATAGAAAGTCCATGGGCACATCAGTTGAAGTCCAAACTGCAAACTCCACTGAAGTTTTCTCGGTTGAAGGAGAAAAAAAGGGCCTTTGCCACCGAATTCAGCGCAGGACCAGAACTCAAGTAATAAAGCAAAAGGAAGACTGGGATGACAGCACTGTAAGTAGTTATGTTTCAAAAATGAGGATGCAGAGTAGAATGGAGGCATCAACCAGAAGAGAAAGAGCACTGGCATATGCTTTCTCACAACAGCTAAGGATTTGTTCAAAGAGAAAATTAACAAAACACAACAGCTTGGAATCAAATATGAGTTGGAGCTGGCTTGAGAGATGGATGGCAACACGCCTTCCAGAGACTTCATCAGTTGAAAGCCATGCCATGAAGCAATATGAACCTTCTAATTGTAATCACAAATTCACAATCATGACAAGATTTTTAGATGCTGCTGGGGAAGAAAAGGAGAGCTGCGGATCAAATGAGGTGCCCCTTCATTTTGATAACTATTCAATCAATTCAGAAGAAGAAAAAGTTAGCTTCAAACCCCACACAGCAAAGGCCAACTTCAAGGCAAGGAGAACCGTTTCAAGACGGAAAACAGTGCCAAGTTATCAATTCCATGAAGAGCAGCAGCCAAAGGTAAGCAAGAAAGATGGTTGGGGAAATGCTAGCAAGGATGTTAAGCAAAAGCAAAAGCAAGCGGGAAGCAGGACAGAGATTACATTAAGCTCCTCGAAAGCTTCTAATGTGTAA 1173 0.4177 MGFTGELVRSVFSKNRSDGSHETKVKRSSAENRRWLSVRSYLCGDEFNSVVAENDSASVKSTEVTVSQSILEDLNDKGDTDSEETVENVTQKRPNSDSKSLTEEEAAILIQSAFRGFLLRRQSGEIRSETGKEEFNLVTESPDRKSMGTSVEVQTANSTEVFSVEGEKKGLCHRIQRRTRTQVIKQKEDWDDSTVSSYVSKMRMQSRMEASTRRERALAYAFSQQLRICSKRKLTKHNSLESNMSWSWLERWMATRLPETSSVESHAMKQYEPSNCNHKFTIMTRFLDAAGEEKESCGSNEVPLHFDNYSINSEEEKVSFKPHTAKANFKARRTVSRRKTVPSYQFHEEQQPKVSKKDGWGNASKDVKQKQKQAGSRTEITLSSSKASNV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0512 390 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Vra6g0512 390 MobiDBLite consensus disorder prediction 322 390 - -
Vra6g0512 390 MobiDBLite consensus disorder prediction 374 390 - -
Vra6g0512 390 ProSiteProfiles IQ motif profile. 103 132 IPR000048 GO:0005515
Vra6g0512 390 MobiDBLite consensus disorder prediction 74 102 - -
Vra6g0512 390 MobiDBLite consensus disorder prediction 350 373 - -
Vra6g0512 390 PANTHER IQ-DOMAIN 33 1 373 - -
Vra6g0512 390 PANTHER IQ-DOMAIN 5-RELATED 1 373 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0512 1 345 IQD Protein Family AT5G35670 41.791 3.34e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0512 - - gsj:114383427 668.307