Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0507 ATGACCCTCACATGCCTATTACTATTCTTAATTCACATTCTGGTGGTAAAAAATTCTGAGGCTAGTAACAATGTTCCTGCTGTCATAGTTTTCGGAGACTCCTCCGTTGATTCTGGGAACAACAACGTCATAGCCACTGTTCTCAAGAGCAACTTCAAGCCCTATGGTCGTGACTTCGAAGGTGGTCGTCCTACGGGACGCTTCTCCAACGGTCGTGTTCCTCCAGATTTCATTGCTGAGGCCTTTGGCATCAAATCAACCATTCCTGCATACTTAGATCCTGCTTATACCATTCAGGATTTCGCCACCGGTGTTTGCTTTGCCTCTGCTGGAACTGGTTATGATAATGCTACTTCTGCTGTTCTGAACGTGATACCACTGTGGAAGGAACTAGAGTTCTACAAGGAATACCAAGCCAGATTGAGAAGCCATGTTGGTGTAGAAAAAGCCAACGAGATCATAAGCGAAGCCTTGTATTTGATGAGCCTAGGAACCAACGATTTTCTTGAGAACTATTATGTGTTCCCAACCCGAAGGATCCACTTCACTGTGTCACAGTATCAAGATTTTCTACTGAGTATTGCTGAGAATTTTGTGAGGGAATTGTATGCACTTGGAGCACGGAAATTGTCCATAACTGGTCTTATTCCCGTAGGGTGTCTACCCTTAGAGAGGGCCACCAACATTTTGGGGGACCATGGTTGCAACGAGGAATACAACAACGTTGCTTTGACCTTCAATGCCAAGCTGGAGAATGTGATAGCAAAGCTTAATAGAGAACTACCACAGTTGAAAGCTTTGTCGGCAAATGCATACTCTATTGTCAATGATATCATTACAAGACCTTCTGCTTATGGATACGAGGTTGCAGAAAAGGCGTGTTGTTCGACAGGAACGTTTGAGATGAGCTACTTGTGCAGTGACAAGAGTCCACTTACATGCACAGATGCTGAAAAGTATGTGTTTTGGGATGCATTTCATCCTACTGAAAAGACAAATCGCATCGTTTCAACCTATTTGATTCCAAAGCTTAAAGCAGCCTTTCGATGA 1050 0.4371 MTLTCLLLFLIHILVVKNSEASNNVPAVIVFGDSSVDSGNNNVIATVLKSNFKPYGRDFEGGRPTGRFSNGRVPPDFIAEAFGIKSTIPAYLDPAYTIQDFATGVCFASAGTGYDNATSAVLNVIPLWKELEFYKEYQARLRSHVGVEKANEIISEALYLMSLGTNDFLENYYVFPTRRIHFTVSQYQDFLLSIAENFVRELYALGARKLSITGLIPVGCLPLERATNILGDHGCNEEYNNVALTFNAKLENVIAKLNRELPQLKALSANAYSIVNDIITRPSAYGYEVAEKACCSTGTFEMSYLCSDKSPLTCTDAEKYVFWDAFHPTEKTNRIVSTYLIPKLKAAFR* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0507 349 CDD SGNH_plant_lipase_like 26 343 IPR035669 -
Vra6g0507 349 Pfam GDSL-like Lipase/Acylhydrolase 28 339 IPR001087 GO:0016788
Vra6g0507 349 Gene3D SGNH hydrolase 14 347 IPR036514 -
Vra6g0507 349 Coils Coil 247 267 - -
Vra6g0507 349 SUPERFAMILY SGNH hydrolase 28 346 - -
Vra6g0507 349 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 348 - -
Vra6g0507 349 PANTHER GDSL ESTERASE/LIPASE EXL3 9 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0507 Vra-Chr6 4353567 4357954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0507 6 345 Pollen Coat Proteome AT1G75910 36.232 6.22e-68 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0507 - - gmx:100809260 629.402