Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0483 ATGAGAGTGATGACATTCTCCATCTTCAAACTTCTTCTCTCTTCATTCCTTCTCTTCACTTTCTTGCAGGAACCCACCAATGCCCTTAGAAAGACGTACATTGTGTACTTGGGAGGACACTCTCATGGTCCAGACCCTTCTCCCACTGATCTTGAAACAGCAACAAATTCCCATCATCAATTACTCGCTTCTGTCTTAGGAAGTCATGAGGATGCAAAGGAAGCAATTATGTACTCTTACAACAAGCATATCAATGGCTTCGCGGCCTTGCTTGAAGAGGAAGAAGCAGCAGAAATTGCAGAGTACCCAGAGGTAGTTTCTGTTTTCTTGAGCAAAGAGCACAAATTACACACTACGAGATCATGGCATTTTCTGGGACTGGAACAAAAGGATGGAAAAGTTCCTGCAGACTCTGCTTGGACCAAAGCAAGATATGGCGAAAACACAATCATAGCTAATATTGATACAGGAGTTTGGCCGGAACACCCGAGTTTTAACGACAGAGGATACGGGGCAGTGCCTTCAAAGTGGCGTGGGAAAGGTGTTTGTGAAATTGACAGTTTTAACACTACACAAAAATATTTCTGTAACAGGAAGCTGATTGGAGCAAGAGTATTCCTGAAGAATCGCGAGGCGGAAGGTGGGGAGATTGAGAGAACGTTCCGCAGCGCACGTGACTTCGTAGGGCATGGCAGCCACACTTTATCAACCGCAGGTGGTAATTTTGTTCCTGGTGCGAATGTAGAACGTAAGGGCAGAGGCACTGCTAAGGGAGGGTCCCCAAAAGCTCGCCTTGTGGCCTACAAAGCATGTTGGAATAAACTGGACACAGGAGGGTGCCACGAAGCAGATTTACTGGCAGCATTTGATCATGCAATTTATGATGGCGTTGATGTCATCTCCGCCTCTGTTGGTTGGTCCTATCCCTACAAGGAAGCTCTGTTAACGGATGGTGTTTCCATTGGATCATTCCATGCAGTTGCCAAAAATATTGTCGTTGTTTGCTCTGCTGGAAATGATGGCCCCTCACGTTCATCCGTCACAAACGTTGCACCTTGGTCTTTCACTGTTGCTGCCAGCACCATGGATAGGGATTTCCTCAGCACCATTTCTCTTGGCAAGAAAAAACACCTTCAGGGTGCCAGTTTCAATCGAGGATTGCCACGACACAAGCGAAAGTTCTATCCCGTTATATCTTCTGTCAACGCAAAACTTTGTAATGCTTCAGTTAATGATGCGCGTATTTGCAAACCAGGAACACTTGATCCTGCCAAAGTAAGAGGGAAAATACTTATCTGCCTTCGAAGTGATAAATTACAATCAGTTAAAGAGGGTGAACAGGGTAAACTTGCCGGTGCTGTGGCAGTTTTTGTGCAGAATGACAAGCAAAGTGGAAATTTACTTCTGGCCGAAAATCAAGTTTTACCTGCTGCAAGTATAAGTGGAACGGATACTAATTTTGCCAATGTTACCAGCGGCGGTGGCGGGATTTTTGCCTACTTGAGTGCTGCTAAAACATATCTAAATGTAAAGCCAGCTCCAATCATGGCTGGATTCTCATCTAGGGGTCCTAATCTGTTGCAACCGTTGATACTAAAGCCTGACATAACTGGTCCGGGTGTGGGTATAATTGCTGCCTTTTCACAAGCCGCGGGTCCTTCTAATCTGCCATCAGATACACGAAGGACTCTTTTCAATGTGCAACAAGGAACCTCTATGGCCTGTCCTCATGTTGCTGGCATTGCAGGTCTTCTCAAAACGTACCACCCAACCTGGAGTCCCGCAGCTATCAAATCTGCTATTATGACTACAGCTACCACTCTAGATAACACGAATAAACCAATCCGGGATGCATTTGATAAGGTAGCAACTCCATTCGAGTACGGAGCTGGACTTGTTCGGCCTAACCTTGCAATAGACCCTGGACTCGTTTATGATCTAAACACAACTGATTACTTGAACTTCTTATGTGCTTCTGGTTACAATCAAGCTCTACTCACATTGTTTTCCAATTATAAAATCTCTTACAAATGTCCCGAGTCTTACAGAATCGAGGATCTGAATTATCCTTCTATTACGGTGCATCATCCTGCCTCAAAGCCTATAAATGTTACTCGCATTGTTACAAACGTTGGAGCTCCAGGCACGTATGTTGTGAATGCTCATGGGCCCAGGGGGATAAAGGTTCGTGTCCTACCAACCTCCTTGACTTTTAAGAGAACTGGAGAAAAGAAGAGGTTTTGGGTTATTCTGCAGGCAATTGCAACGCCCAGAGGGTTACCTTTATTTGGGAATTTGACTTGGACAGATGGCAAACACAATGTAACTAGTCCTATTACAGTGTTGTAA 2349 0.4487 MRVMTFSIFKLLLSSFLLFTFLQEPTNALRKTYIVYLGGHSHGPDPSPTDLETATNSHHQLLASVLGSHEDAKEAIMYSYNKHINGFAALLEEEEAAEIAEYPEVVSVFLSKEHKLHTTRSWHFLGLEQKDGKVPADSAWTKARYGENTIIANIDTGVWPEHPSFNDRGYGAVPSKWRGKGVCEIDSFNTTQKYFCNRKLIGARVFLKNREAEGGEIERTFRSARDFVGHGSHTLSTAGGNFVPGANVERKGRGTAKGGSPKARLVAYKACWNKLDTGGCHEADLLAAFDHAIYDGVDVISASVGWSYPYKEALLTDGVSIGSFHAVAKNIVVVCSAGNDGPSRSSVTNVAPWSFTVAASTMDRDFLSTISLGKKKHLQGASFNRGLPRHKRKFYPVISSVNAKLCNASVNDARICKPGTLDPAKVRGKILICLRSDKLQSVKEGEQGKLAGAVAVFVQNDKQSGNLLLAENQVLPAASISGTDTNFANVTSGGGGIFAYLSAAKTYLNVKPAPIMAGFSSRGPNLLQPLILKPDITGPGVGIIAAFSQAAGPSNLPSDTRRTLFNVQQGTSMACPHVAGIAGLLKTYHPTWSPAAIKSAIMTTATTLDNTNKPIRDAFDKVATPFEYGAGLVRPNLAIDPGLVYDLNTTDYLNFLCASGYNQALLTLFSNYKISYKCPESYRIEDLNYPSITVHHPASKPINVTRIVTNVGAPGTYVVNAHGPRGIKVRVLPTSLTFKRTGEKKRFWVILQAIATPRGLPLFGNLTWTDGKHNVTSPITVL* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0483 782 CDD Peptidases_S8_3 114 606 IPR034197 -
Vra6g0483 782 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 21 782 - -
Vra6g0483 782 Gene3D Peptidase S8/S53 domain 149 652 IPR036852 GO:0004252|GO:0006508
Vra6g0483 782 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Vra6g0483 782 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Vra6g0483 782 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Vra6g0483 782 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Vra6g0483 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Vra6g0483 782 Gene3D - 363 508 - -
Vra6g0483 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 782 IPR045051 -
Vra6g0483 782 Pfam Subtilase family 146 610 IPR000209 GO:0006508|GO:0008236
Vra6g0483 782 Pfam Fibronectin type-III domain 686 781 IPR041469 -
Vra6g0483 782 Gene3D - 656 782 - -
Vra6g0483 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Vra6g0483 782 ProSiteProfiles Serine proteases, subtilase domain profile. 121 639 - -
Vra6g0483 782 SUPERFAMILY Subtilisin-like 116 643 IPR036852 GO:0004252|GO:0006508
Vra6g0483 782 CDD PA_subtilisin_like 369 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0483 Vra-Chr6 4014605 4020039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0483 20 781 Subtilisin-like Serine Gene Family AT5G59810 52.842 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0483 - - gmx:100796255 1211.82