Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0482 ATGAGAGTGATGACATTCTCCGTCTTCAAACTTCTTCTGTCATCATTCCTTCTCTGCACTTTCTTGCAGGAACCCGCCAATGCCCTTAGAAAGACGTACATTGTGTACTTGGGAGGGCACTCTCATGGTCCAGAGCCTTCTCCCACTGATCTTGAAACAGCAACAAATTCCCATCATGAATTACTCGCTTCTGTCTTAGGAAGTCATGAGGACGCAAAGGAAGCAATAATGTACTCTTACAACAAGCATATCAATGGCTTCGCGGCCTTGCTTGAAGAGGAAGAAGCAGCAGAAATTGCAGAGTACCCAGAGGTAGTTTCTGTTTTCTTGAGCAAAGAGCACAAATTGCACACTACGAGGTCATGGGATTTTCTGGGACTGGAAAAGAATGGAAAAGTTGCTGAAAACTCTGCTTGGAGAAAAGCAAGATATGGGGAAAACACAATCATAGCCAACATTGATACAGGAGTTTGGCCAGAACACCCAAGCTTTAACGACAAAGGATACCGGGCAGTACCTGAAAAGTGGCGCGGGAAAGGTGTTTGTGAAATTGACAGTTATAACACTACACAAAAACATTTTTGTAACAGGAAGTTGATCGGAGCAAGAATATTCTTGAAGAATCGCGAGGCGGAAGTTGGGAAGATTGAGAGCGCGTTCCGCAGTGCACGTGACTTCGTAGGGCATGGGAGCCACACTTTATCAACTGCAGGTGGTAGATTTGTTCCTGGTGCGAATGTAGAACGTAATGGCAAAGGCACTGCTAAGGGAGGGTCCCCAAAAGCTCGCCTTGTGGCCTACAAAGCATGTTGGAATAAACTGGACACAGGAGGGTGCCACGAAGCAGATTTACTGGCAGCTTTTGATCATGCAATTTATGATGGCGTTGATGTCATCTCCGCCTCTATTGGTTGGTCCAATCCCTACAGGGAAGCTCTGTTAACGGATGGTATTTCTATAGGATCATTCCATGCAGTCCAAAAAAATATTGTCGTTGTTTGCTCTGCTGGAAATGATGGCCCCTCACCTTCAACTGTCACAAACGTCGCACCCTGGTCCTTCACCGTTGCTGCCAGCACCATGGATAGGGATTTCCTCAGCACCCTTTCTCTTGGCAAGGACAAAAAAGTTGAGGTTGCCAGTCTTAATCGAGGCTTTCGACGAAATGAGCGAAAGTTTTATCCCATCATATTTTCTGTCAAAGCAAAGCTTCGTAATGCCTCCGCTGATGACGCGCGTGTTTGCAAACCGGGAACTCTTGATCCTACCAAAGTAAAAGGGAAAATACTTGTCTGTCTTCGAAGTGATAAATTACAATCTGTTAAAGAGGGTGAACAGGGTAAACTTGCCGGTGCTGTGGCAGTTTTGGTGCAGAATGATAAGGAAAGTGGAAATTTACTTCTGGCCGAAAATCAAGTTTTACCTGCTGGAAGTATAAGTGGAACAGATACTGATTATGCCAATCGTACAGCCGCCGGTACAAGCGGCGGTGGCGGGATATTTGCCTACTTGAGTGCTGCAAAAACACATCTAAATGTAAAGCCAGCTCCAATCATGGCTGGATTCTCATCTAGGGGTCCTAGTCTGGTGCAACCGTTGATACTAAAGCCTGACATAACTGGTCCGGGTGTGGGTATAATTGCTGCCTTTTCACAAGCCGCGGGTCCTTCTAATCTTGCATCAGATACACGTAGGACTCTTTTCAATGTGCAACAAGGAACTTCTATGGCCTGTCCTCATGTTGCTGGCATTGCGGGTCTTCTCAAAACCTACCATCCAACCTGGAGTCCCGCAGCCATCAAATCTGCTATTATGACTACAGCTACAACTTTAGATAACACGAAGAAACCAATTCAGAATGCATTTGATAAGGTAGCAACTCCATTTGAATACGGTGCCGGACACGTTCAACCTAACCTTGCAATAGACCCTGGACTCGTTTATGATCTAAACACAACTGATTACTTGAACTTCTTATGTGCTTCTGGTTACAATCAAGCCCTTCTCAAGTTTTTTGCCAATTTGGAAGTCCCTTACAAATGTCCAAAGTCTTTCAAAATTGAAGATCTTAACTACCCTTCAATTACAATACATCATCCCACTTCAAAGCCTAAGCATGTTACTCGCACTGTTACAAACGTTGGGCCTCCAGGCAAATATAATGTGAGTACTAATCCACCCAAAGGGATTAAGATTGTTGTTGAACCAAGTTCCTTGACTTTTAAGAAAACCGGAGAAAAGCAGACGTTTCATGTTACTCTGCAGGCAAATGGAGTGCCACATGGGTTACCCTTATTTGGGAATTTATCTTGGACAGATGGCAAGCACACAGTAACCAGTCCAATCACTGTGCTTTAA 2358 0.4466 MRVMTFSVFKLLLSSFLLCTFLQEPANALRKTYIVYLGGHSHGPEPSPTDLETATNSHHELLASVLGSHEDAKEAIMYSYNKHINGFAALLEEEEAAEIAEYPEVVSVFLSKEHKLHTTRSWDFLGLEKNGKVAENSAWRKARYGENTIIANIDTGVWPEHPSFNDKGYRAVPEKWRGKGVCEIDSYNTTQKHFCNRKLIGARIFLKNREAEVGKIESAFRSARDFVGHGSHTLSTAGGRFVPGANVERNGKGTAKGGSPKARLVAYKACWNKLDTGGCHEADLLAAFDHAIYDGVDVISASIGWSNPYREALLTDGISIGSFHAVQKNIVVVCSAGNDGPSPSTVTNVAPWSFTVAASTMDRDFLSTLSLGKDKKVEVASLNRGFRRNERKFYPIIFSVKAKLRNASADDARVCKPGTLDPTKVKGKILVCLRSDKLQSVKEGEQGKLAGAVAVLVQNDKESGNLLLAENQVLPAGSISGTDTDYANRTAAGTSGGGGIFAYLSAAKTHLNVKPAPIMAGFSSRGPSLVQPLILKPDITGPGVGIIAAFSQAAGPSNLASDTRRTLFNVQQGTSMACPHVAGIAGLLKTYHPTWSPAAIKSAIMTTATTLDNTKKPIQNAFDKVATPFEYGAGHVQPNLAIDPGLVYDLNTTDYLNFLCASGYNQALLKFFANLEVPYKCPKSFKIEDLNYPSITIHHPTSKPKHVTRTVTNVGPPGKYNVSTNPPKGIKIVVEPSSLTFKKTGEKQTFHVTLQANGVPHGLPLFGNLSWTDGKHTVTSPITVL* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0482 785 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Vra6g0482 785 Pfam Fibronectin type-III domain 689 784 IPR041469 -
Vra6g0482 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Vra6g0482 785 CDD PA_subtilisin_like 368 510 - -
Vra6g0482 785 Pfam Subtilase family 145 614 IPR000209 GO:0006508|GO:0008236
Vra6g0482 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Vra6g0482 785 MobiDBLite consensus disorder prediction 701 720 - -
Vra6g0482 785 Gene3D Peptidase S8/S53 domain 148 655 IPR036852 GO:0004252|GO:0006508
Vra6g0482 785 CDD Peptidases_S8_3 114 609 IPR034197 -
Vra6g0482 785 Gene3D - 362 511 - -
Vra6g0482 785 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 21 785 - -
Vra6g0482 785 MobiDBLite consensus disorder prediction 706 720 - -
Vra6g0482 785 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Vra6g0482 785 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Vra6g0482 785 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Vra6g0482 785 Gene3D - 659 785 - -
Vra6g0482 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 785 IPR045051 -
Vra6g0482 785 ProSiteProfiles Serine proteases, subtilase domain profile. 121 642 - -
Vra6g0482 785 SUPERFAMILY Subtilisin-like 116 646 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0482 Vra-Chr6 4007471 4012043 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0482 32 784 Subtilisin-like Serine Gene Family AT2G04160 53.439 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0482 - - gmx:100796255 1206.05