Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0480 ATGGCATCTTCCATCTTCAAACTTTTCCTATCATCAATCATTCTTTGTACCATGTTGCAGCCTTACACTGAAGCTCTCAGAAAGACCTATATTGTATACTTGGGAGAACATTCTCACGGTCCAAATCCTTCCCTTCGTGATATTGAGTCAGCCACAAATTCTCACCATGATTTACTGGCTCCATTCCTGGGAAGCCATGAGAAAGCAAAGGAAGCAGTGATGTACTCATACAATAAGCACATAAATGGCTTTGCTGCACAGCTTGAAGAGGAAGAGGCATCAGAGATTGCAAAACACCCAAGTGTAATTTCTGTGTTCTTGAGCAAAGAGTATAAATTGCACACTACCAGATCATGGGACTTTCTTGGGCTGGAAAAATATGGAGGAATTCCTGCAGAATCAGCTTGGTGGAAAGGAAAATTTGGAGAAGATACAATTATTGGTAATCTCGATTCAGGCGTTTGGCCCGAACACCCAAGTTTCAACGACAACGGATATGGTCCTCTGCCATCAACGTGGCGAGGGAACGGAGTCTGTCAGATTGACCGTGTTTCTCTTCCAAACAAGACATTCTGTAACAGGAAGTTGATTGGAGCAAGAATCTTCAGCAAAGGTTACGAGGCACATAATGGGAAACTTGATCCTTCAAAACACACGGCACGTGACTTTGTTGGCCACGGCACCCATACCATGTCAATTGCTGCTGGTAACTTCGCTCCTGGTGCAACTGTCTTTGGCAATGGCAATGGCACTGCAAAGGGTGGATCCCCAAAGGCTCGTATCGCTGCATACAAAGTGTGTTGGTCTACAAATGATGCTGGTAGCTGCCATGAAGCAGACATTCTACAAGCGTTTGATCATGCCATAAATGATGGTGTTCATGTCATCACTGCTTCCATCGGTGGCTCTAATCCCTATATTGAAGCCTTCTTCACAGATGGGATTTCCATAGGGGCATTCCATGCAGTTGCTAGAAACATAGTTGTAGTTTGCTCTGCTGGGAACGATGGACCAGCACCTAGAACTGTCGTAAATGTTGCACCCTGGACTTTCACAGTTGCTGCCAGTACAATCGACAGGGATTTTCTCACCAACATTTCTCTTGGTAAAAATCACCACCTTAAGGGAGCCAGTCTTAATAGAGGCTTACCATCACGGAAATATTATCCATTGGTTCATGCTGCCAATGCTAGACTTCTTAATGCGACAATTGATGACGCTCGACTTTGCAAACCGGGAACGCTTGATACTACCAAAATAAAGGGAAACATATTGATCTGCATTCGACGTGATAAAACATCATCAGTAGCTCAGAGTTACGAAGCTGATAATGCTGGCGCAGTGGGAGTGTTTGTGGTCAATGACGACAAAAGTGGCAACACACTTCTAGCCGAGCCTTACAGTATACCAGGTGCAAATGTGGATCCCTATGAGGACGCGGATATAGATGAACGTGAATGGTGGGGAAAAGGAGGTTCCGACAACAACAATAGCAGGAAACTTGCTGCTTACATGACTGTAGCAAGAACATATTTAGGTATAAAACCTGCTCCAATTATGGCTGGATTCTCATCCAGGGGTCCCAGTGCAGTGCAGCCATTGATACTGAAGCCAGACGTAACTGCCCCTGGTGTGAACATATTGGCGGCTTATTCACTAGCCGCAAGTCCATCAAATCTACCATCAGATAGACGCCGTATTCCTTTCAATATGCAACAGGGAACCTCTATGTCAGGCCCTCATGTTGCTGGTATCGCAGGTCTTCTCAGAACACTTCATCCTGATTGGAGTCCAGCAGCTATTAAATCAGCCATTATGACTACTGCTACCACACTGGATAACAACAACCTACCGATTCGGGACGCATTTGATCAGATAGCAAGTCCGTTTGATTATGGCTCCGGACATATTCAACCTAACCATGCCATGGACCCTGGACTTGTTTATGACATGAGAAAGAGGGATTACTTGAACTTCATATGCGCTCATGATCACAGCCAAAATTTTCTCAGATACTTTAGCAGCATCTCGTACAATTGCCCAGAGTCCTACAACATTGAAAATCTTAACTATCCTTCTATCACGGTAGCAAATCGAGGGTTGAACCCTATAAATGTTACTCGGACAGTTACCAATGTGGGGACTCCAACAAGCACATATGTTGTGAAAGCTAACATAACTGAAGGATTTAAGGTTCTTGTTCAACCAAGTTCATTGTCTTTTAAGACTATTGGAGAAAAGAAGACATTTCGGGTTATTCTTCAGGCAACGAGTTGGCCCAGTAACGGTTTTCCAGTATTTGGGAACTTGTCTTGGACAGATGGAAATCACACAGTAACCAGTCCTATTGTAGTCCTTTAA 2361 0.4418 MASSIFKLFLSSIILCTMLQPYTEALRKTYIVYLGEHSHGPNPSLRDIESATNSHHDLLAPFLGSHEKAKEAVMYSYNKHINGFAAQLEEEEASEIAKHPSVISVFLSKEYKLHTTRSWDFLGLEKYGGIPAESAWWKGKFGEDTIIGNLDSGVWPEHPSFNDNGYGPLPSTWRGNGVCQIDRVSLPNKTFCNRKLIGARIFSKGYEAHNGKLDPSKHTARDFVGHGTHTMSIAAGNFAPGATVFGNGNGTAKGGSPKARIAAYKVCWSTNDAGSCHEADILQAFDHAINDGVHVITASIGGSNPYIEAFFTDGISIGAFHAVARNIVVVCSAGNDGPAPRTVVNVAPWTFTVAASTIDRDFLTNISLGKNHHLKGASLNRGLPSRKYYPLVHAANARLLNATIDDARLCKPGTLDTTKIKGNILICIRRDKTSSVAQSYEADNAGAVGVFVVNDDKSGNTLLAEPYSIPGANVDPYEDADIDEREWWGKGGSDNNNSRKLAAYMTVARTYLGIKPAPIMAGFSSRGPSAVQPLILKPDVTAPGVNILAAYSLAASPSNLPSDRRRIPFNMQQGTSMSGPHVAGIAGLLRTLHPDWSPAAIKSAIMTTATTLDNNNLPIRDAFDQIASPFDYGSGHIQPNHAMDPGLVYDMRKRDYLNFICAHDHSQNFLRYFSSISYNCPESYNIENLNYPSITVANRGLNPINVTRTVTNVGTPTSTYVVKANITEGFKVLVQPSSLSFKTIGEKKTFRVILQATSWPSNGFPVFGNLSWTDGNHTVTSPIVVL* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0480 786 SUPERFAMILY Subtilisin-like 113 647 IPR036852 GO:0004252|GO:0006508
Vra6g0480 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 786 IPR045051 -
Vra6g0480 786 Gene3D - 359 512 - -
Vra6g0480 786 CDD PA_subtilisin_like 365 481 - -
Vra6g0480 786 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vra6g0480 786 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Vra6g0480 786 PRINTS Subtilisin serine protease family (S8) signature 573 589 IPR015500 -
Vra6g0480 786 ProSiteProfiles Serine proteases, subtilase domain profile. 118 643 - -
Vra6g0480 786 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Vra6g0480 786 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 18 786 - -
Vra6g0480 786 Gene3D Peptidase S8/S53 domain 144 656 IPR036852 GO:0004252|GO:0006508
Vra6g0480 786 CDD Peptidases_S8_3 111 610 IPR034197 -
Vra6g0480 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 574 584 IPR023828 -
Vra6g0480 786 Pfam Subtilase family 142 615 IPR000209 GO:0006508|GO:0008236
Vra6g0480 786 Pfam Fibronectin type-III domain 688 785 IPR041469 -
Vra6g0480 786 Gene3D - 660 786 - -
Vra6g0480 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0480 Vra-Chr6 3993194 3997795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0480 29 785 Subtilisin-like Serine Gene Family AT2G04160 50.526 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0480 - - gmx:100794135 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0480 6 3993194 3997795 Vra6g0480 6 3993194 3997795 ECH