Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0463 ATGGAGAACAGATTCAGATTATCAGTTTTCTTCATGTTATGGGCTTCTATGGTGCATAGTGCAGAATCTGAGTGTAAGAGGGACTGTGATTTAGCTCTAGCTTCCTACAATCTAACAGGAGGTGACTTGACATATGTATCAAAGCTTATGAAATCTGAGGTTGTTTCTAAACCTGAAGATATTCTCCCCTACAACAGTGAAACCATAAAAAACAAAGACCAGGTGCAAGCCTTTACCAGAGTGAACGTTCCATTCCCTTGCGATTGCATTGGAGATTTTCTAGGTCATATATTCAAATATGACGTTGTATCAGGTGACACTTACATGTCCATCGCCACTCAGAATTATTCCGATTTGACCACTGTTCAGTTGTTGCAGAGCTTCAACTCATATTCACCAACTGGTCTTCCTGATACTGCGACTCTTGATGTCTACGTTAACTGTTCCTGTGGGAATAGTGACATTTCCAAGGATTATGGTTTGTTCATCACATACCCTCTTAGACCTGAGGATTCTTTGCAGTCAATTGCCAAAGAGACTGGGATAGAGAGTGACTTGCTGCTTAAGTACAACCCGGGTGTAAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGGAAAGGTCTCGAGCTAAGAGTTATCGCTGGAATATCTGCTGGAGTAGTAACGGCATTTCTGCTATTGGCATTTTGTGGGTATGTTACATATTACCGAAGAAAGAAGGTATGGAAGAGGAATTTGCTCACAGATGAATTCATGATGAACTCGGCCAGAGTTATGAATGATGAAGCCTCTGGTGTTCCCGATGCAGAAATTGGTACGAACACCATTAGTGTGGACAATTCAGCAGAGTTTTCATATGAAGAACTAGCCAATGCTACAAATAACTTCAGTCTCGCTAGCAAAATTGGTCAAGGTGGTTTTGGGGAAGTCTATTACGCAGAGCTTAATGGAGAGAAAGCTGCAGTTAAAAAGATGGACATGCAAGCAACAAGAGAATTTCTAGCTGAACTGAAAGTATTGACACGTGTTCATCACTTGAACCTGGTGCGTTTGATTGGATATTGTATTGAGAGCTCCCTTTTCCTTGTTTATGAATACATTGAGAATGGCAACTTAGGACAACATCTACGTAGATCAGATTTTGATCCTTTGCCATGGTCTGCCCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGTCTACAGTACATTCATGAGCATACTGTGCCTGTATATATCCATCGCGACATAAAGTCAGAAAACATTTTGATAGACAGAAAGTTATGTGCCAAGGTTGCAGATTTTGGTTTAACCAAGTTGATTGATGTTGGAAGTTCATCACTTCTCACAGCTAACATGAAGGGCACATTTGGTTACATGCCACCAGAGTACGCATATGGCAACGTTTCTCCCAAAATCGATGTCTATGCTTTTGGTGTTGTTCTTTATGAACTAATTTCTGCTAAAGAAGCATTGATCACGGGTGGTGTACATGGTGCTCAATTGAAGGGCCTTGTGTCTTTGTTTGATGCAGCTTTTGATCAGCAAGATCCCACAGAAGGTCTTAAGAAACTGGTGGATCCTAGGTTAGGAGATAACTACCCAATCGATTCAGTTTGCAAGATGGCACTACTTGCCAAAGCATGCACAGAGAGTGATCCACAACAACGTCCAAATATGAGTTCTGTTGTGGTTACTCTCACAGCACTTACTTCAAATAGTGAGGATTGGGATATTGCTTCCATCATTGAAAATCCAGCTCTAGCAAATCTTATGTCTGGGAAATAG 1791 0.4121 MENRFRLSVFFMLWASMVHSAESECKRDCDLALASYNLTGGDLTYVSKLMKSEVVSKPEDILPYNSETIKNKDQVQAFTRVNVPFPCDCIGDFLGHIFKYDVVSGDTYMSIATQNYSDLTTVQLLQSFNSYSPTGLPDTATLDVYVNCSCGNSDISKDYGLFITYPLRPEDSLQSIAKETGIESDLLLKYNPGVNFSQGSGLVYIPGKGLELRVIAGISAGVVTAFLLLAFCGYVTYYRRKKVWKRNLLTDEFMMNSARVMNDEASGVPDAEIGTNTISVDNSAEFSYEELANATNNFSLASKIGQGGFGEVYYAELNGEKAAVKKMDMQATREFLAELKVLTRVHHLNLVRLIGYCIESSLFLVYEYIENGNLGQHLRRSDFDPLPWSARVQIALDSARGLQYIHEHTVPVYIHRDIKSENILIDRKLCAKVADFGLTKLIDVGSSSLLTANMKGTFGYMPPEYAYGNVSPKIDVYAFGVVLYELISAKEALITGGVHGAQLKGLVSLFDAAFDQQDPTEGLKKLVDPRLGDNYPIDSVCKMALLAKACTESDPQQRPNMSSVVVTLTALTSNSEDWDIASIIENPALANLMSGK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0463 596 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 596 IPR044812 GO:0019199|GO:0045087
Vra6g0463 596 SMART serkin_6 298 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g0463 596 Gene3D Transferase(Phosphotransferase) domain 1 369 586 - -
Vra6g0463 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Vra6g0463 596 ProSiteProfiles LysM domain profile. 163 212 IPR018392 -
Vra6g0463 596 Pfam LysM domain 100 135 IPR018392 -
Vra6g0463 596 Pfam LysM domain 168 196 IPR018392 -
Vra6g0463 596 Gene3D Phosphorylase Kinase; domain 1 270 368 - -
Vra6g0463 596 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Vra6g0463 596 PANTHER LYSM RECEPTOR KINASE 1B 4 596 - -
Vra6g0463 596 Pfam Protein tyrosine and serine/threonine kinase 300 567 IPR001245 GO:0004672|GO:0006468
Vra6g0463 596 ProSiteProfiles Protein kinase domain profile. 298 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra6g0463 596 SUPERFAMILY Protein kinase-like (PK-like) 276 568 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0463 Vra-Chr6 3856514 3860875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0463 1 596 Receptor kinase-like Gene Family AT3G21630 54.080 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vra6g0463 PK_Tyr_Ser-Thr 7.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0463 - K13429 gmx:100803042 959.518