Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0431 ATGGCAGGTAATCTACCAACAGCAACTGAAGGACGCCCCTTGAAATGTAAAGCTGCGATTTGCCGCAAGCCTGGCTCTCCACTGACTATTGAGGAGATCCTTGTAGCACCTCCATTGCCTCGTGAAGCAAGGATTCGTGTTATATGCACTTCTCTCTGTCATACCGATGTTACATTTTGGAATATGCAGGATCCTTCTCCAAGAATCTTGGGTCATGAGGCTGTTGGGGTTGTGGAAAGTGTTGGAGAGGGTGTAACTGAACTTACAAAAGGAGATTTGGTTGTCCCAATTTTCTTAGCTGATTGTGGGGAGTGTTTAGATTGCAAATCAAGCAGGAGCAATCTTTGTTCAAATTTTCCTTTTGAATTCTCTCCTTGGATGCCTAGAGATGGCACATCAAGATTCAAGGATTCAAAAGGAGAGATCATACAGCATTTCATGTTTGTTTCTAGTTTTAGTGAGTACACTGTGATTGACACTGCCCATCTAACCAAGGTTGATCTACCAATACCACCCAAGCTGGCATGCCTACTTGGCTGTGGAATATCAACTGGAGTAGGTGCTGCTTGGAAATCTGCAGGGGTGGAGCCAGGCTCTACAGTAGCCATTTTTGGGCTGGGAAGTATTGGATTAGCTGTTGCTGAGGGAGCTAGAATTTGTGGAGCAACTAAGATTATAGGTGTGGATATCAACCCAGAGAAATATGAAGTTGGAAAAAAGTTTGGAGTCACTGACTTTGTCCATTCTGGAGAAAGTAAAGACAAAACTGTGAGCCAGATAATCATTGAGATGACTGATGGGGGAGCAGACTATTGCTTCGAATGTGTTGGCAAGGCATCACTGATGGAAGATGCATACGCTTCTAGTAGAAGGGCTTGGGGAAAAACGGTAGTTGTAGGATTGGACAAGCCAGGATCCAAGTTGAGCCTTGACTGTGGTGAAGTACTGCTCAGTGAGAAGACACTCAGGGGATGCTTATTTGGAGGACTCAAACCTAAGACTGATGTACCTACTCTCATGAAACGCTACCTGGATAAGGAACTGAATCTGGATGAGTTTGTCACACATGAGGTGCAGTTTCAGGATATCAACAAAGCTTTTGATTTGTTGATTGAAGGAAAGAGTCTCCGATGTGTGATCTGGATGGACAAGTGA 1155 0.4424 MAGNLPTATEGRPLKCKAAICRKPGSPLTIEEILVAPPLPREARIRVICTSLCHTDVTFWNMQDPSPRILGHEAVGVVESVGEGVTELTKGDLVVPIFLADCGECLDCKSSRSNLCSNFPFEFSPWMPRDGTSRFKDSKGEIIQHFMFVSSFSEYTVIDTAHLTKVDLPIPPKLACLLGCGISTGVGAAWKSAGVEPGSTVAIFGLGSIGLAVAEGARICGATKIIGVDINPEKYEVGKKFGVTDFVHSGESKDKTVSQIIIEMTDGGADYCFECVGKASLMEDAYASSRRAWGKTVVVGLDKPGSKLSLDCGEVLLSEKTLRGCLFGGLKPKTDVPTLMKRYLDKELNLDEFVTHEVQFQDINKAFDLLIEGKSLRCVIWMDK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0431 384 PANTHER ALCOHOL DEHYDROGENASE 9 381 - -
Vra6g0431 384 SUPERFAMILY GroES-like 9 191 IPR011032 -
Vra6g0431 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 345 IPR036291 -
Vra6g0431 384 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 381 - -
Vra6g0431 384 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Vra6g0431 384 Pfam Alcohol dehydrogenase GroES-like domain 41 165 IPR013154 -
Vra6g0431 384 Gene3D - 185 325 - -
Vra6g0431 384 SUPERFAMILY GroES-like 333 381 IPR011032 -
Vra6g0431 384 Gene3D - 19 377 - -
Vra6g0431 384 Pfam Zinc-binding dehydrogenase 209 341 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0431 Vra-Chr6 3529682 3533208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0431 48 370 Monolignol Biosynthesis Gene Families AT2G21730 24.412 2.57e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0431 K00121 - gmx:100806887 629.402