Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0385 ATGGGAACAAACGAGACTCGGGTAAGCATAAGCAACACAATTTTCAGAGGAGTAGTGTTCGACGAGAAGAATTCACACCCAGATGGGAGATTTATCATCTACAATGTTCAGATTGATATCCCACCAAAGATTGTATCTGATGGCATCTGGGGTAACACTGATATTGGCGCATTACCTGATAAAACGGTAGTGCCTCTGTTGGAATTCCAAATTCTCACCATTTTCGTCGTCACACAATGTTTTCATCTGGTACTCAAGCGTCTGGGGTTCCCCTATTTCGTTTCTCAAATGATGACTGGGTTTGTTTTAGGTCCTTCTCTCAAGATAGATTCGTTGAAAGAACGAAAAAGCTTGTTGTTCCCATACGGTACTGAAGACTTGTTGAACCTAGTATCATCATTAGGGTACACATTCTTCATGTTTCAAAATTCGGTGCTAATGGATTTCAGCATGATAACGAGAACTGGGAAGAAAGCTTGGGCAATCGCTCTTTCCTCCCTGATGATTCCAACGGTTGTTGGTCTGTCCCTGTGCTATTATTTCATGGAGCACGTGCAGAAAACCCTAGGAGAGTTTGATGGAGATAATCTCCCCGTGATAGTAATAGGGCACAGTGGTTGCTCCTTCACAGTGATAGCTTCTCTTCTCTCTGATCTGAAGATTTTGAACTCTGAACTTGGACGCTTAGCACTTTCAGCAGCTCTTGTAATGGATGTGATAAACTCAGTTGTGACAGGATTAGGCACTGCTATAATAACTAGTCTTAAAACACATCCTCACGATGGTAGCAAAGGAGCTGAACTTGTGATGTACGCTGCCACCAAATACGTTCTTTTCGTGACAACTGTGATTATGATCGGACGCCCCGCAATGAAGTGGATAGTGAGAAACACACCCGAAGGAAGACCTGTGAAGAAAGCATACACCTTTGTGGTTGTCCTCATGACCTTGTTGGCTGGGTTGTTCGGATTGTTCGCTCACCAGACTGTGTTAGGTGGGGTTGTCCTCTTTGGCCTTCTTGTGCCAGAAGGTCCTCCACTAGGCTCTGAACTTATCAAACAGTTTGAGTTGTTCACAACTTGGTTCCTTTTGCCGATCTTTGTCACATGTTGTGCCATGAAGATTGATATCTCCGCACAGATGAATAGCCAATTGGTCGTTCCTGTGGTCACAGTAATTGTTATCGTGCATTTGATTAAGATTCTTTTCACCATTGGAATTTGCAGCTACTGCAACATGCCCATAACCGACGGTTTATGCCTTGCTCTCATGTTGAGCTGCAAAGGTGTCGTGGATTATGTCACCAACGTCTTCCTCTTTGATTCAATGTTCTTGAGCAATGAAACGGTTTCCATGATGGCCATATCAATACTGGTGTTAGGAAGCATTGCACGCATCGGGGTGAAATCCCTCTACGACCCAACAAGGAAATACGCATGCTATCAGAAAAGGAACATCCTGAACTTGAAACCCAACGCAGAGTTTCGAGTGGTAGCATGCATCCACAAATCAAGCCACATAATGTCTGTAAAAAACGTTCTTGACATTTGTTGCCCCACGATAAGCAGCCCCTTAGTGGGTCACGTCTTGCATCTGAAGGAACTGGTTGGTAGATCCTCTCCCATCTTCATATCACACCGTCTTCAAGAAAGGGTTGGCTCAAACCACAACTACTCCGAAGATGTGATCGTAGCATTCGACCTCTTCGAACATGACAGAGCGGGAACTGCGGTAGTTAGCACCTACACAGCCATCTCTCCCTTACGTTTCATGCATGACGATATCTGTTACCTTGCATTGGACAAAGTGGCTTCCATCATCATTCTTCCATTTCACGTGAGATGGGAAGAGGATGGTTCCATCAGTTCAGCAGATCAAAACATAAGAACTCTCAACGCTAAGGTTCTTAGAAGAGCACCATGCTCCGTGGGGATTCTGGTGAACCGAGGATCTTCTTCTTCTTCCTCTACTCACAACAACTGCATCATGACTAATTCAGGGAAACGAATAGCAGTGATCTTTCTGGGGGGTTCAGACGATCGAGAGTCATTGTGCTTGGCTAAGAGGAGCATGAGAGATTGTTCTTGCAACTTGGTGGTGTACCACTTGGTTTGGGCCCACTGTGAGGCAAACTGGGATATGATGCTGGATGATGAGGTGTTGAAGAGTGTAAGGGGGTACTATGGTAGGCTTGAGAATGTGTCGTATGAACTTGTGACCATTCATCAAGCTTCTGAGACGAGTGCTTTTGTTTCAAGCATTGCAAATCAGCATGATTTTTTCATAGTTGGGAGGCGCCATGGTATGAAATCGCCGGTAACGGCAGCACTTGAGAGTTGGACGGAGTTTCCTGAGTTGGGTGTGATCGGAGATTTGCTTGCTTCCCCCGATAGCAGAACCGATGCTTCAATTCTTGTAGTACAACAACAACAAACGTCCAAGGTTGTCACAAAAGAGATAGATATATAA 2469 0.4475 MGTNETRVSISNTIFRGVVFDEKNSHPDGRFIIYNVQIDIPPKIVSDGIWGNTDIGALPDKTVVPLLEFQILTIFVVTQCFHLVLKRLGFPYFVSQMMTGFVLGPSLKIDSLKERKSLLFPYGTEDLLNLVSSLGYTFFMFQNSVLMDFSMITRTGKKAWAIALSSLMIPTVVGLSLCYYFMEHVQKTLGEFDGDNLPVIVIGHSGCSFTVIASLLSDLKILNSELGRLALSAALVMDVINSVVTGLGTAIITSLKTHPHDGSKGAELVMYAATKYVLFVTTVIMIGRPAMKWIVRNTPEGRPVKKAYTFVVVLMTLLAGLFGLFAHQTVLGGVVLFGLLVPEGPPLGSELIKQFELFTTWFLLPIFVTCCAMKIDISAQMNSQLVVPVVTVIVIVHLIKILFTIGICSYCNMPITDGLCLALMLSCKGVVDYVTNVFLFDSMFLSNETVSMMAISILVLGSIARIGVKSLYDPTRKYACYQKRNILNLKPNAEFRVVACIHKSSHIMSVKNVLDICCPTISSPLVGHVLHLKELVGRSSPIFISHRLQERVGSNHNYSEDVIVAFDLFEHDRAGTAVVSTYTAISPLRFMHDDICYLALDKVASIIILPFHVRWEEDGSISSADQNIRTLNAKVLRRAPCSVGILVNRGSSSSSSTHNNCIMTNSGKRIAVIFLGGSDDRESLCLAKRSMRDCSCNLVVYHLVWAHCEANWDMMLDDEVLKSVRGYYGRLENVSYELVTIHQASETSAFVSSIANQHDFFIVGRRHGMKSPVTAALESWTEFPELGVIGDLLASPDSRTDASILVVQQQQTSKVVTKEIDI* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0385 822 Pfam Sodium/hydrogen exchanger family 74 461 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra6g0385 822 Gene3D - 67 479 IPR038770 -
Vra6g0385 822 PANTHER CATION/H + ANTIPORTER 19 813 - -
Vra6g0385 822 PANTHER CATION/H+ EXCHANGER 2 19 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0385 Vra-Chr6 3034475 3037247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0385 40 807 Antiporter Super Family AT3G44900 37.406 1.46e-163 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0385 - - vra:106763250 1581.23