Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0379 ATGAAACAGGGAAGAGGAACAACCTCTTTTCATCCTATCTCATCAATTCTCTCTTCTCTTCTCCTTTTCCTCTCTCTCTCAGGATCTGCTCATGCTTACAAGAATTACACTGTCGGAGACTCCTTAGGCTGGTTTGACAACACTCAAAACTCCAATGTCAATTATCAGAAGTGGGCTGACACTAAAAAATTCACCTTAGGAGATTTCCTCATTTTCAACACAGACACTAACCACTCTGTGGTTCAGACATACAACTTTACGACATACAAGGAATGTGATTACGATGATGCTCAAGACAAAGACACGACCCAGTGGTCGGCATCTGATCCATCCAACACCCAAACACATCCTGTGACGGTGGCGATTCCTCTGATGAAGGAGGGCACAACGTACTTTTTCTCTGGTGATTATGATGGTGATCAGTGCAGGAGTGGACAACACTTCCAAATAAATGTGACCTATGGAGAAGGGTTGCCCAAAAGTCTGAAAGCCCCAGAAGATGCCCCATCTCCTGCTAATGCTGTTGCTGGAGATGATGATTCAGCACCGGACACCATTGTCCCTTCCAACTTCAACCATCCTAAAACAGAAGAAACTGATGATGATGACAAAGCTAGTGACAAACAAAACTCTACTTCTTTCTCAGTTTCACTGTCTGCACAGCTTCACCTTGTCCTATTAGGAACCCTACTTTTCTTCCTTTGA 705 0.4383 MKQGRGTTSFHPISSILSSLLLFLSLSGSAHAYKNYTVGDSLGWFDNTQNSNVNYQKWADTKKFTLGDFLIFNTDTNHSVVQTYNFTTYKECDYDDAQDKDTTQWSASDPSNTQTHPVTVAIPLMKEGTTYFFSGDYDGDQCRSGQHFQINVTYGEGLPKSLKAPEDAPSPANAVAGDDDSAPDTIVPSNFNHPKTEETDDDDKASDKQNSTSFSVSLSAQLHLVLLGTLLFFL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0379 234 Gene3D - 32 154 IPR008972 -
Vra6g0379 234 PANTHER BLUE COPPER PROTEIN 13 175 IPR039391 GO:0009055
Vra6g0379 234 CDD Phytocyanin 34 152 - -
Vra6g0379 234 MobiDBLite consensus disorder prediction 159 210 - -
Vra6g0379 234 MobiDBLite consensus disorder prediction 194 208 - -
Vra6g0379 234 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055
Vra6g0379 234 Pfam Plastocyanin-like domain 44 146 IPR003245 GO:0009055
Vra6g0379 234 PANTHER BNAA08G26900D PROTEIN 13 175 - -
Vra6g0379 234 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0379 13 204 Phytocyanin Superfamily AT1G08500 60.513 1.46e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0379 - - gmx:100499721 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0379 6 2994575 2996422 Vra6g0379 6 2994575 2996422 ECH